Gene SeHA_C0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0056 
Symbol 
ID6490157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp56563 
End bp57249 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content48% 
IMG OID642740345 
Producttranscriptional regulator CitB 
Protein accessionYP_002044019 
Protein GI194448313 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.993904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCA TTACGACACT CATCGTTGAA GACGAACCGA TGCTAGCGGA AATCCTGGTG 
GACACCATCA AGCTTTTTCC CCAGTTTTCA ATCGTCGGCA TCGCAGACAA ACTGGAAAGT
GCAAAGAAGC AAATACGCCT CTATCAACCA CAGTTAATTC TATTGGATAA TTTTTTACCC
GATGGCAAAG GGATTGATTT AATTCGTCAT ACCATCAGCA CCAACTACAC GGGGCGAATT
ATTTTCATTA CCGCCGACAA TCATATGGAT ACCATCAGCG ATGCCTTACG CATGGGCGTA
TTCGATTATC TGATTAAGCC GGTACATTAT CAGCGCCTGC AGCATACCCT GGAGCGGTTC
ACCCGTTACC GCAGTTCGTT ACGTTCCAGT GAGCAGGCAA ACCAGACGCA CGTTGATGCC
TTATTTAATA TCCAGGCCAA AGAACAAACC GCAGAACCGA ATAGCGGACT GCGGGGAATT
GATGAAAACA CCTTCAACCG GGTACGACAA ATATTCGCCG ACCCGCAGGC AGTACATACA
GCAGACACTC TGGCGCAAAT TCTGGGCAGC AGTAAAACCA CTGCCCGACG CTATCTGGAA
CAAGGCGTGA AAAATAACTT TCTCGAAGCG GAGATCAGCT ACGGGAAAGT GGGCAGGCCG
GAGAGACTCT ATCGCGGCAA AGTATGA
 
Protein sequence
MDSITTLIVE DEPMLAEILV DTIKLFPQFS IVGIADKLES AKKQIRLYQP QLILLDNFLP 
DGKGIDLIRH TISTNYTGRI IFITADNHMD TISDALRMGV FDYLIKPVHY QRLQHTLERF
TRYRSSLRSS EQANQTHVDA LFNIQAKEQT AEPNSGLRGI DENTFNRVRQ IFADPQAVHT
ADTLAQILGS SKTTARRYLE QGVKNNFLEA EISYGKVGRP ERLYRGKV