Gene SeHA_C0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0044 
SymbolnhaR 
ID6491988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp42881 
End bp43774 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content51% 
IMG OID642740333 
Producttranscriptional activator NhaR 
Protein accessionYP_002044007 
Protein GI194448540 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCATA TTAACTACAA CCATCTTTAT TACTTCTGGC ATGTCTATAA AGAAGGTTCT 
GTCGTGGGTG CCGCAGAGGC GCTTTTTCTG ACGCCGCAAA CCATTACTGG TCAAATTAAA 
GCCCTGGAAG AGCGTTTACA GGGGAAGCTA TTTAAACGTA AGGGACGCGG TCTTGAGCCC 
AGCGAACTGG GCGAGCTGGT TTTTCGCTAT GCGGACAAAA TGTTTACGCT AAGCCAGGAG 
ATGCTGGATA TCGTCAATTA CCGCAAAGAA TCAAACCTGT TGTTTGATGT CGGCGTCGCC 
GATGCTTTAT CCAAGCGTCT GGTCAGCAGC GTTCTGGATG CGGCGGTGGT GGTGGACGAA 
CCCATACATC TGCGTTGCTT CGAGTCCACG CACGAAATGT TGCTCGAACA GCTCAGCCAG 
CACAAGCTGG ATATGATTAT CTCCGACTGC CCGATAGATT CCACGCAGCA GGAGGGGCTA 
TTCTCAGTCA AAATCGGCGA ATGTAGCGTC AGTTTCTGGT GTACGAATCC GCTTCCTGAA 
AAAGCGTTCC CTGCCTGCCT GGAAGAGCGA CGGTTGCTGG TGCCGGGACG GCGCTCAATG 
CTGGGGCGTA AGTTGTTGAA CTGGTTTAAT TCGCAGGGGT TGCAGGTTGA GATCCTCGGC 
GAATTTGATG ACGCGGCCTT AATGAAGGCG TTTGGCGCGA CGCACGATGC GATTTTTGTG 
GCGCCGAGCC TTTATTCGCT GGATTTTTAT GCCGATGAGT CGGTAATAGA GATTGGGCGC 
GTGGAGAATG TCATGGAAGA ATATCATGCG ATTTTTGCCG AGAGAATGAT CCAGCATCCG 
GCGGTGCAGC GTATTTGCAA TGCGGACTAC TCGGCATTGT TTAAACTACA GTAG
 
Protein sequence
MSHINYNHLY YFWHVYKEGS VVGAAEALFL TPQTITGQIK ALEERLQGKL FKRKGRGLEP 
SELGELVFRY ADKMFTLSQE MLDIVNYRKE SNLLFDVGVA DALSKRLVSS VLDAAVVVDE 
PIHLRCFEST HEMLLEQLSQ HKLDMIISDC PIDSTQQEGL FSVKIGECSV SFWCTNPLPE 
KAFPACLEER RLLVPGRRSM LGRKLLNWFN SQGLQVEILG EFDDAALMKA FGATHDAIFV 
APSLYSLDFY ADESVIEIGR VENVMEEYHA IFAERMIQHP AVQRICNADY SALFKLQ