Gene SeHA_C0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0039 
Symbol 
ID6490093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp38492 
End bp39688 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content49% 
IMG OID642740330 
Productchondroitin sulfate/heparin utilization regulation protein 
Protein accessionYP_002044004 
Protein GI194451770 
COG category[R] General function prediction only 
COG ID[COG0641] Arylsulfatase regulator (Fe-S oxidoreductase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGGA AAAGCTGTCA GGTAATGATC AAACCGACCG GGTCGGTGTG TAATCTTGAT 
TGTAAATATT GCTTCTATCT GGAAAAGGAA ATGCTCTATC CCGATAGAAA AAACCATTAC
AAGATGACGG AAGAAACGCT GGCGTTGTTT GTGCAACAGC ATATTGCGGC GCAGGACGTG
GATGAAGTGA TTTTTGCGTG GCAGGGTGGG GAACCGACGC TGATGGGGCT GCCATTTTAC
CGCCAGGCTG TAGCGCTCCA GCAACGTTAT GCTAATGGAA AAGCCATCGT TAATACTTTT
CAGACCAATG GCATTCTGAT TGATGATGAA TGGGCGAGAT TCTTCAGGGC GCATGACTTT
CTGGTTGGTA TTTCGATTGA TGGCGATGCG GCGCTGCACG ACGAATGGCG AGTAACTCGC
GCAGGGCAAC CTACCCATCA TAAAGTTGAA CAGGCGATAA AATGCCTGGC GAGTCATGGC
GTTGAATTTA ATACTCTCAC GGTGGTGAGT CAGAGCAATA TGCTGCACCC GCAGCGGGTT
TATGCGTATC TGAAATCTAT CGGCAGCCGC TATATGCAGT TTATTCCGCT AGTGGAAAGA
GCGGCAAATA AAGACGGAAT GCTGGCGCAT CCGCAGGACG AGCAAACCGC AGTAACCCCC
TGGTCAGTGG ACGGATTACA GTTTGGAAAG TTCCTGAATG CCATTTTTGA TATCTGGATC
CGCGAAGATA TTGGTGATAT CGGCATTCAA CTCTTTGAAC AAACGCTGGC GGCATGGTGT
GGACTCCCCC CTCAGGTTTG CGTTTTTGCG CCCGTTTGCG GTAGCGCTTT TGCAATGGAA
ATGAATGGCG ATGTGTATAA CTGCGATCAT TTCGTTTACC CGCAATATAA GCTCGGCAAT
ATTAACGACA CGCCGCTGCG TCAGATGAAT AATAGCGCGC AAAACCAGCA GTTTGGTCTC
GATAAAAGCC GCACGATGGC GCAGGAATGC CATACCTGCC CGTGGCAATT CGCCTGTTAT
GGCGGTTGCC CTAAACACCG CTTTTTGCCT TCGGCTTGCG GACCGATGAA GCAAAACTAT
CTTTGTGCCG GCTATCAGTG CTTTTTCTCT CATACCGCGC CAATGATGAA AGCGATGAAA
ACCCTTTACG TAAATAACCT GTCACCGGCG GAGATCCGGT CTGTTTTTTT TAAGTAA
 
Protein sequence
MQRKSCQVMI KPTGSVCNLD CKYCFYLEKE MLYPDRKNHY KMTEETLALF VQQHIAAQDV 
DEVIFAWQGG EPTLMGLPFY RQAVALQQRY ANGKAIVNTF QTNGILIDDE WARFFRAHDF
LVGISIDGDA ALHDEWRVTR AGQPTHHKVE QAIKCLASHG VEFNTLTVVS QSNMLHPQRV
YAYLKSIGSR YMQFIPLVER AANKDGMLAH PQDEQTAVTP WSVDGLQFGK FLNAIFDIWI
REDIGDIGIQ LFEQTLAAWC GLPPQVCVFA PVCGSAFAME MNGDVYNCDH FVYPQYKLGN
INDTPLRQMN NSAQNQQFGL DKSRTMAQEC HTCPWQFACY GGCPKHRFLP SACGPMKQNY
LCAGYQCFFS HTAPMMKAMK TLYVNNLSPA EIRSVFFK