Gene SeHA_C0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0029 
Symbol 
ID6490540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp31194 
End bp31712 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content56% 
IMG OID642740323 
Productfimbrial subunit 
Protein accessionYP_002043997 
Protein GI194449817 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0756629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACG ATATCCTGTA CGGCATCGGG ATGCTGCTGG CGGCATCCGG CGTCCAGGCG 
CACGATGGCC GGGTCTATGT CTCCGGAACC ATCACGGACA ATACGTGTTC GCTCTCTCCA
GGCTCGGAAA ATATTAACGT GGCGATGGGC GCGGTTTCTC AACGGCAGTT TTATCGCGCA
GGCGACGGTT CTGCATGGCA ACCTTTTGCT ATCGATTTAC AAAACTGCGG CAGCACTGCC
AGCGGCGTAA CGGTCAGTTT TAGCGGTGCG GCGGACAGCC GTAATACGGA TTTATTGGCG
CTTACCGCAG GGGAAAGCGA CGCTTCAGGC ATTGGGATTG CGCTTTATGA TCAAAATAAA
ACCTTAATCC CACTGGGGCA GGAGAGTGAT GTGGTGACGC TCAGTCCGGG CCAGGCGTCG
GCGCATCTGC AATTTTATGC GCGTTATCTT GCCGATGGCG GCGCGGTAAC GCCCGGGGAC
GCCAATGCCT CCGCAACCTT CATTCTTGCC TATGAATAA
 
Protein sequence
MRNDILYGIG MLLAASGVQA HDGRVYVSGT ITDNTCSLSP GSENINVAMG AVSQRQFYRA 
GDGSAWQPFA IDLQNCGSTA SGVTVSFSGA ADSRNTDLLA LTAGESDASG IGIALYDQNK
TLIPLGQESD VVTLSPGQAS AHLQFYARYL ADGGAVTPGD ANASATFILA YE