Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeHA_C0024 |
Symbol | |
ID | 6488138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 |
Kingdom | Bacteria |
Replicon accession | NC_011083 |
Strand | + |
Start bp | 25693 |
End bp | 26211 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642740318 |
Product | fimbrial subunit |
Protein accession | YP_002043992 |
Protein GI | 194447857 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.478086 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 90 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCTG CAATTGCCTT TGGCGGAATG TTGTCCACCG CGCAAGCGGA TACTACAACC GTCACTGGCG GTACGGTAAA TTTTGTCGGA CAGGTCGTTG ACGCCGCCTG TTCTGTTTCC GCTGACTCTG TCGATCAGAC CGTGACATTA GGCCAGGTTC GCGCCAGTAA ATTAACCGAG GCCGGTATGG TGGCGAATCA AAAAGAAGAT TTCACCATTA AACTGGAAGA CTGCGATACT CAGACCAGCC AGAATGCGGC GGTGATTTTT AATGGCCAAC AGGACGCAAA CCAGCCGGGG TCGCTGGCGA ATACCGCTGG GGCAGGTTCG GCGACGAATG TGGCATTACA ACTTTATGGA CCAGATGGCC AGGCGCTGAA TATCGGTGAA TCGTCCAGTA CTGTTACCTT GAACGATGGC GAAAACGTTA TTCCGCTTAG CGTGGATTAT ATCGCTACCG GTACGGCGAC TGCCGGTAAT GTTACCGCGA CGGCGACATT TAGCATGGTT TATTCCTGA
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Protein sequence | MVSAIAFGGM LSTAQADTTT VTGGTVNFVG QVVDAACSVS ADSVDQTVTL GQVRASKLTE AGMVANQKED FTIKLEDCDT QTSQNAAVIF NGQQDANQPG SLANTAGAGS ATNVALQLYG PDGQALNIGE SSSTVTLNDG ENVIPLSVDY IATGTATAGN VTATATFSMV YS
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