Gene SeHA_C0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0024 
Symbol 
ID6488138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp25693 
End bp26211 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content52% 
IMG OID642740318 
Productfimbrial subunit 
Protein accessionYP_002043992 
Protein GI194447857 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.478086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCTG CAATTGCCTT TGGCGGAATG TTGTCCACCG CGCAAGCGGA TACTACAACC 
GTCACTGGCG GTACGGTAAA TTTTGTCGGA CAGGTCGTTG ACGCCGCCTG TTCTGTTTCC
GCTGACTCTG TCGATCAGAC CGTGACATTA GGCCAGGTTC GCGCCAGTAA ATTAACCGAG
GCCGGTATGG TGGCGAATCA AAAAGAAGAT TTCACCATTA AACTGGAAGA CTGCGATACT
CAGACCAGCC AGAATGCGGC GGTGATTTTT AATGGCCAAC AGGACGCAAA CCAGCCGGGG
TCGCTGGCGA ATACCGCTGG GGCAGGTTCG GCGACGAATG TGGCATTACA ACTTTATGGA
CCAGATGGCC AGGCGCTGAA TATCGGTGAA TCGTCCAGTA CTGTTACCTT GAACGATGGC
GAAAACGTTA TTCCGCTTAG CGTGGATTAT ATCGCTACCG GTACGGCGAC TGCCGGTAAT
GTTACCGCGA CGGCGACATT TAGCATGGTT TATTCCTGA
 
Protein sequence
MVSAIAFGGM LSTAQADTTT VTGGTVNFVG QVVDAACSVS ADSVDQTVTL GQVRASKLTE 
AGMVANQKED FTIKLEDCDT QTSQNAAVIF NGQQDANQPG SLANTAGAGS ATNVALQLYG
PDGQALNIGE SSSTVTLNDG ENVIPLSVDY IATGTATAGN VTATATFSMV YS