Gene SeHA_C0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0020 
Symbol 
ID6489599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand
Start bp17868 
End bp19967 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content51% 
IMG OID642740314 
Productexochitinase 
Protein accessionYP_002043988 
Protein GI194450498 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3325] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.871167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAA GCAAACTGAT TCAAGGCGAT ACAATTACTG AAACTACTCA TGCAGCGAAT 
GGTTTTGACC CTGCAACAAG CGATGATAAA ATAAGCTATA CTTCCGCTCG TGTTGCGAAA
CCGGTATACA ATAAATATAA AAATTCCACG ACTAAACCGA AGGTATTCGG TTATTACACC
GACTGGTCAC AGTATGACAG CCGTCTGCAA GGCAATATGT CCCAACCGGG CCGTGGTTAT
GATTTAACCA AAGTTTCACC GACGGCTTAT GACAAACTGA TTTTTGGCTT TGTTGGCATC
ACCGGTTTCA GAAAAATTGA TACAGAAGAC CGCGATGTCG TAGCAGAAGC GGCAGCGCTG
TGCGGCAAAG TGAAATATGA GCCGACCTTC CTCGACCCAT GGGGCGACTT CCAGTCTTAT
ATCAACCTCG GCTTTGATGT CAGCGGCTGG GATGTGGATC CGAAGACTGT AACTCAGTCT
AACGCCAAGG GTCTGCTGGG CGCGCTGCGT GATATGCAGG CAAAAGCGAA AGCCGCAGGT
CACACGCTGG CGCTCTCCAT GAGTATCGGC GGCTGGAGCA TGAGTAACGG GTTCCACGAA
ACCGCCGCTT CTGACTCTTC TCGTAAAATC TTCGCCAAAG GCGTGGTGAA ACTGTTCAAA
CAGTTCCCGA TGTTCAGCGA AGTGGATATT GACTGGGAAT ACCCGAACAA TGAAGGGGCG
GGCAACCCGT TTGGTCCGGA AGATGGCGCT AACTACGCGC TGCTGATTGC CGAACTGCGT
AAACAGCTGG ATTCCGCTGG TCTGAGCAAT GTGAAGATCT CTATTGCCGC TTCTGCTGTC
ACTACTATTT TTGACTATGC GAAAGTAAAA GATCTGATGG CTGCCGGCCT GTATGGCATC
AACCTGATGA CCTATGACTT CTTCGGTACG CCGTGGGCGG AAACGCTGGG CCACCACACC
AACCGCAAAG CGCTGGAAGA GGGCGGCTGG GCTGTCGAAA CTATCGTTGA TCACCTGCTG
GCGGAAGGTT TCTCCGCTGA CCGTATCAAC ATCGGTTATG CCGGCTATAC CCGTAACGCT
CGTCAGGTAG AAATTGAATC CCTGTCGCCG CTGAAAGGTT CTTACAACCC AGGTTCAGGC
CCTACTACCG GTTCCTTCGA ATCCGGCACC AGCGAATGGT ATGACGTCAT TTATAGCTAC
CTGGATCTGG AAAACCAGAA AGGCCGTAAC GGTTTCAACG TTTACACCGA CCAGGTCGCT
GATGCTGACT ACCTGTATAG CCCGGAATCC AAACTGTTTT TATCCCTGGA TACGCCGCGT
ACTGTCAAAG CAAAAGGCGA ATATGCAGCG AAACTGGGCC TGGGCGGCGT GTTTACCTGG
ACTATCGATC AGGACAACGG CGTGCTGGTT AACGCCGTGC GTGAAGGTCT GGGTTATGAA
ATCGAATCTG AAGTTATCGA TATGGAACCG TTCTACTTTG AAGGTATCAA TGTAGAAAAA
GATGAAGAGC AGAGCGACAG CGACGACGCG CAGAAGGTCA ACCACGCGCC GAAAGCGGCG
ATTGAACTGA TGGTTGTAGG CGGATCTACG GTACAGCTGT CTGGCGCAGG TTCTTCTGAT
GAAGATAACG ATGAGTTGTC CTTTAGCTGG GGCGTGCCTT CTCAAATCGA TGTGGCAGAC
AAAACGGCAG AAATCATTGA GGTTGTGGTA CCGGAAGTTA GCGAAAAAAC AGCCTTTCAG
TTCACCCTGT TTGTACGCGA CTGCTACAAC GAACCGTCCT CTCAACAGCG CTTTGTTCTG
ACGGCTGTGC CTGCGCTATC TCAGGTTCAA CCGGAACCGG AAGAGGAAGA AGAGATTATC
GTTCCTGTAC CGGACGAGGA AGAAGATACC ACGCCGGCTG AGGATGATAC GCCAGCAGAT
GACAAAACGT CACCTTACGC GCAGTGGGAT GCTTCTACCG TTTATGGCGC AAACTGGGGT
TCTTTCGAAA TCGTTAGCTG GAAAGGCCAT AACTATCAGG TGAAATGGTG GTCTATGGGC
AACCAGCCTG ACCTGAACTG CGGTGTCGGC GGTGCATGGA CCGATCTTGG CGCTTACTAA
 
Protein sequence
MATSKLIQGD TITETTHAAN GFDPATSDDK ISYTSARVAK PVYNKYKNST TKPKVFGYYT 
DWSQYDSRLQ GNMSQPGRGY DLTKVSPTAY DKLIFGFVGI TGFRKIDTED RDVVAEAAAL
CGKVKYEPTF LDPWGDFQSY INLGFDVSGW DVDPKTVTQS NAKGLLGALR DMQAKAKAAG
HTLALSMSIG GWSMSNGFHE TAASDSSRKI FAKGVVKLFK QFPMFSEVDI DWEYPNNEGA
GNPFGPEDGA NYALLIAELR KQLDSAGLSN VKISIAASAV TTIFDYAKVK DLMAAGLYGI
NLMTYDFFGT PWAETLGHHT NRKALEEGGW AVETIVDHLL AEGFSADRIN IGYAGYTRNA
RQVEIESLSP LKGSYNPGSG PTTGSFESGT SEWYDVIYSY LDLENQKGRN GFNVYTDQVA
DADYLYSPES KLFLSLDTPR TVKAKGEYAA KLGLGGVFTW TIDQDNGVLV NAVREGLGYE
IESEVIDMEP FYFEGINVEK DEEQSDSDDA QKVNHAPKAA IELMVVGGST VQLSGAGSSD
EDNDELSFSW GVPSQIDVAD KTAEIIEVVV PEVSEKTAFQ FTLFVRDCYN EPSSQQRFVL
TAVPALSQVQ PEPEEEEEII VPVPDEEEDT TPAEDDTPAD DKTSPYAQWD ASTVYGANWG
SFEIVSWKGH NYQVKWWSMG NQPDLNCGVG GAWTDLGAY