Gene SeHA_C0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_C0016 
Symbol 
ID6489427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011083 
Strand+ 
Start bp15015 
End bp15962 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content40% 
IMG OID642740310 
Productputative transcriptional regulator 
Protein accessionYP_002043984 
Protein GI194449168 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.944151 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATCGA AAGGTGCCAA CAAGAGCTTT GATTATAATT TAATCAAAAT TCTTGACGCT 
GTTATTTTGT CAGGAAATGC GGCTATGGCG GCAAAAAAGT TAGGCATTAC ACCGGCTGCC 
GTTTCTCTGG CGTTAAAGCG CCTGCAGAGT TATTACCCGG AAGAACTGTT TAGCAGAGGG 
AAAGGCGGGC TCATCCCCAC AGCTAAGGCT GTCGACATTC ACCAAAATTT CAGTCAGGTG 
ATGAAACTGG TGGATGACAC ATTTCTCTGT AATAGCAAAA AAGATGAAGC GTTCCAGATA 
ACGTTATTAG GCAGTGATAT TGTTGAAAGC TATTATCTTT CTCAGCTCTA TAACAGCGAT 
ATATTTGACC GTATTTTGAT AAATCATTTC ACTGTCAGAA ATATGAGTCG GGAGCATATC 
AGCGAACTTC TGTTTACTGC GCAAGGCGAT CTGTTGATTA GTGCCGAACC TTTGCTGGAG 
TCCGGCATAG AGAATCAAAT TATTGATAGT TTTAAATCAT TTGTTTGTAT CTGTAGCAGT 
AAACACATGC TGAGTACCCT CTCACAACTG TCGCTACATC ATTTTTATTC TTCGCGTCAT 
GCGTTATATC AGCCGGGGAT GGGGGCTTCA GTGATATATC ATGATAGCGA ATTATTTAAG 
GATGATCTTT ACTATACTGG CAGGCGTATT GTCGGCTATC GCAGTGATTC GCTTAACGGT 
TTGATGAGCA TGATCGAACG AACCTCATTG ATTGCATTGA TGCCTTTGAA ATTAGCGCTT 
TTTTATAAAA ATCATCGTAA ATATGACATT AAATTTATTC AGCCTCCGCC CGAACTGGCT 
TTGAAGTCAG TTCAGGTCTA TGCATCCTGG AATAAAAATA GTAGAAATAT ATCGACGATT 
AATGAGATGG TAAGTATGTT ACAAACACTT TCCTCCTTCC GTCGTTAA
 
Protein sequence
MGSKGANKSF DYNLIKILDA VILSGNAAMA AKKLGITPAA VSLALKRLQS YYPEELFSRG 
KGGLIPTAKA VDIHQNFSQV MKLVDDTFLC NSKKDEAFQI TLLGSDIVES YYLSQLYNSD 
IFDRILINHF TVRNMSREHI SELLFTAQGD LLISAEPLLE SGIENQIIDS FKSFVCICSS 
KHMLSTLSQL SLHHFYSSRH ALYQPGMGAS VIYHDSELFK DDLYYTGRRI VGYRSDSLNG 
LMSMIERTSL IALMPLKLAL FYKNHRKYDI KFIQPPPELA LKSVQVYASW NKNSRNISTI 
NEMVSMLQTL SSFRR