Gene SeHA_A0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0116 
Symbol 
ID6487540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand- 
Start bp81752 
End bp83047 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content49% 
IMG OID642740277 
ProductPilO protein 
Protein accessionYP_002043951 
Protein GI194447268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATG AAGATATCAA CCCGGTTGTG CTTCTCGCAG ATCCTAAAGT AAATCATCGC 
GTGTGGGCAG CCTGTCTTAA ATGGAGTCCT GTCGTAAAAA AACAGCGAGT CCCTTCTCAT 
CAGAAACACA AGCCCCATGT AAAATCCAGA CGGCTTACCT CTCTGAAAGT GACTGTAGGC 
AGCAGAAGTT CCCGTGGGAA GATCAGCCGC ATTACCGGCA CAGGAATACT GGCCAGGCCG 
GAGCGCAATC ATTATTTTTC CCTTGCTCTG GCTTTCTGCT CATGGGTGAG AAATGGATAC 
GGCGTCTTCC GGTACAGCGA TAAGGAGCTT TTATTCCTTG CCTCCATTAA TGGCCAGCCT 
GCCGTTATGG CTGATCTGTC AGGAAATGAT GCTGATGTTG CTCAAAAGGT CAGTCTTTTT 
CTGACGATGA ACGAAGAGCC CCCCGAAAAA TGGCAGGTCG TATCTCCTCT GGAACATCCT 
GATAACTGGG AAAGTATTAT TACCCGGTTA TCATCAGCAG ATCTCCGCCG TTGCAAACTT 
ACTGTCGGCA ATCGCAGCAA ATTCACACTG CCTGCCGTAC TGTTTTTAGT AGCAGCCGGC 
GCAGGCACTG TATTCTGGAT GACTCAGCCA GAGCCGGATG TCGTACCGAC GCCCGAGGAG 
ATAGCTGCAC GGGCAAGATT GCAGTTTAAA AAGCCCGATC CACCGCCAGA ACTCCCGCAT 
CCATGGGCAT CACAACCTGT AATCAGTGAT TTTCTGAAAG CCTGCGCGGA CCTTCGAAAA 
CCATCACCGG TCGCGCTAGA AGGCTGGAAA CTTACCGGTG GAACATGTAC TCCCGAGACA 
TTCACACTGA TTTACGAACG ACAGCCAGGA GGAACTATTG AAGGCTTTCT GGCAAGAAGC 
AAAGAAATCT TTAATGTTAT TCCTGACTTT AACCTTAAAG ATGGTGCACG CCTGGCTTCT 
GTAACCCGGC CACTGCCTTC CCTGCCCCGC AGGGATGAGG CAGTCCCTAC CCCCTCAGAA 
CAACTGATGC GGGTGTTCAC GTGGTTTCAG AAAAAACAGT TAACGCCGGC CATTAATGAA 
ATAGCCATAC CGGAACCATT ACCAGGTAAC GATGGTGAAC CAGCCCCTGT TCAGAAATGG 
AAAGAATATC AGTTCAGTTT ATCAACGCCT GTAAATCCTG ATGAGTTGTT CCCTTTATTT 
CAGGATACCG GCGTTCGTCT GAGCAATATC CATTTTGAAT TAAACGGCGG TACTTTCAGT 
TATTCCTCAG AAGGTCATAT TTATGCGTCC AGGTAA
 
Protein sequence
MADEDINPVV LLADPKVNHR VWAACLKWSP VVKKQRVPSH QKHKPHVKSR RLTSLKVTVG 
SRSSRGKISR ITGTGILARP ERNHYFSLAL AFCSWVRNGY GVFRYSDKEL LFLASINGQP 
AVMADLSGND ADVAQKVSLF LTMNEEPPEK WQVVSPLEHP DNWESIITRL SSADLRRCKL 
TVGNRSKFTL PAVLFLVAAG AGTVFWMTQP EPDVVPTPEE IAARARLQFK KPDPPPELPH 
PWASQPVISD FLKACADLRK PSPVALEGWK LTGGTCTPET FTLIYERQPG GTIEGFLARS 
KEIFNVIPDF NLKDGARLAS VTRPLPSLPR RDEAVPTPSE QLMRVFTWFQ KKQLTPAINE 
IAIPEPLPGN DGEPAPVQKW KEYQFSLSTP VNPDELFPLF QDTGVRLSNI HFELNGGTFS 
YSSEGHIYAS R