Gene SeHA_A0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeHA_A0114 
Symbol 
ID6487549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Heidelberg str. SL476 
KingdomBacteria 
Replicon accessionNC_011081 
Strand
Start bp79749 
End bp81302 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content47% 
IMG OID642740275 
ProductATP-binding protein 
Protein accessionYP_002043949 
Protein GI194447225 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAT ATAATCTGAA GGATGCTCTC CTTTTTATAT CCAGGGGAGA CACCCATGAA 
ATTCTTATAG AAACAAACCA GCGGACAAGG CCTGACGTAC AAAGTAATCT CCAGGAGCTG
CTAAAATTAT ATCCGGATAT CAACCCAAAA GTAGTCTCGT TGTCGGAGTT ACAGGAGGCA
GGTCAGGATG AGAAAAACAG AGGCCCGAAA GAACGAATTA TTCATCTGAA AGACCTTGCT
GATGTCAGTG AAAGTGAGAA GAAAGTTCTA TCTTATTTTG AAACTGCCAG AAAACTTGGT
GCTTCAGATA TTCATTTCTT AATTTCAGAG TCTATTTTCA AAGTTCGCAT GAGAATATTC
GGTGAACTGC AGACTGTAGA TGAAGATCAA CCAGCACTGG GCTATTCACT TTGCGCAACA
GCCATTCTGT CAATGGCTGA TGTCACTGAA ACCAGTTTCT TCCCTCAAAG GGAGCAGGAT
GCGCGCCTGT CCCCACAATT AATGCGAAAA ATAGGAATAT TTGGTGCACG CTACAGTCAC
AGACCTACGG GAGACGGTCT GATTGCAGTT ATGCGCCTGA TACCCGATGA CGGAGATAAA
GTTCCCACGT TTAAACAACT GGGCTTTATC CCGGAACAAA TCCGGTTGCT GAACATAATG
CTGCGCCGCC CGGAAGGAAA AATAGTCCTG TCAGGTCCAA CCGGTTCCGG TAAATCGACA
ACGTTACGCA GCGCCTGCCG TGTATATCTT GACGATAATC AGGGGCGACA CCTGCTAACA
ATCGAAGATC CGCTGGAAGG ACAGATACTG GGAGCAACAC AGACTCCGAT TATCTGCGAC
AAATCCGACG AAGATGCCGT CAAACTGGCA TGGAGTCGGG CTATTTCATC GGCAATGCGA
CTTGACCCTG ATGCCATCAT GGAAGGGGAA ATGCGCGATC TTATCTCGAT GATGTCAACC
ACCTACGCGG CACAGACCGG GCACATAGTT CTGACGACAT TACATACAAA CTCAGCTCTG
GGTATACCGG AGCGAATGAT TACGATGGGT ATGAATGCCG ATCTTATTTG CGATGCGCAA
TTACTGATTG GGATGATCAG CCAGCGCCTT GTACCAACTC TGTGTCCCTC CTGCCGTATT
CCATGGGAAA AGCGAGCACC TGAACTTAGC GACGACGAGC GTGATTACCT TGAGCGGCAC
TGCAATAAAG ATTCACTCTG CAGTACAGAT AATATCTGGT TCCGAAATCA TCACGGATGC
TCTGAATGTA ATCACGACGT AATCATTAAC GGCAGAAAGC GCGGTGAAAT AGGTAAAGGC
CTCACCGGCA GGACTGTAAT TGCTGAGGTG ATAGAACCTG ATAACCGCTT ATTTCAGATT
CTGAAAACAC GCGGCAAAGT TGCAGCACGT AAATACTGGC TGGAAAACAT GAAAGGCATC
AGTCGTGTAG AGCATCTTCT TCGCCGTATC AATGAAGGTC TGGTAGACCC TCTTGAAGCC
GACAGAATCA TCCCTCTGGA CGAAGACGAG CGCCTCAGCA TCGATGATGT CTAA
 
Protein sequence
MDKYNLKDAL LFISRGDTHE ILIETNQRTR PDVQSNLQEL LKLYPDINPK VVSLSELQEA 
GQDEKNRGPK ERIIHLKDLA DVSESEKKVL SYFETARKLG ASDIHFLISE SIFKVRMRIF
GELQTVDEDQ PALGYSLCAT AILSMADVTE TSFFPQREQD ARLSPQLMRK IGIFGARYSH
RPTGDGLIAV MRLIPDDGDK VPTFKQLGFI PEQIRLLNIM LRRPEGKIVL SGPTGSGKST
TLRSACRVYL DDNQGRHLLT IEDPLEGQIL GATQTPIICD KSDEDAVKLA WSRAISSAMR
LDPDAIMEGE MRDLISMMST TYAAQTGHIV LTTLHTNSAL GIPERMITMG MNADLICDAQ
LLIGMISQRL VPTLCPSCRI PWEKRAPELS DDERDYLERH CNKDSLCSTD NIWFRNHHGC
SECNHDVIIN GRKRGEIGKG LTGRTVIAEV IEPDNRLFQI LKTRGKVAAR KYWLENMKGI
SRVEHLLRRI NEGLVDPLEA DRIIPLDEDE RLSIDDV