Gene SNSL254_A4958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4958 
SymbolstbA 
ID8864412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp388863 
End bp389399 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content47% 
IMG OID 
Productfimbrial protein major type 1 subunit 
Protein accessionYP_003495230 
Protein GI291080898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.0414161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATGA AAAAGTATTT AGCAATGATC ACAGGCTCAC TTCTTGTCTC CAGCAGCGCG 
ATGGCTGTTT CTGATAACAC CATCACCTTT CAAGGGGAAG TCTCTGATGA AACATGCTCT 
GTCGTGATTA ATGGTAATCA GGCTAAACCC GTCGTGTTAT TGCCAACAGT AAGTACTAAA 
GACTTATCAG AACAAGGGAA AACTGCGGGG CCAATAACGT TTGATATTGG GCTGTCCGGG 
TGTACCGGCT CTAAGGACAA AACAACAAAA ATTTCCACTG TCTTTGTCGG TAATCAGGTC 
ACCAGTAACG GTAACCTGGG TAATACTGGC AGCGCGAAAA ATGTTGAAGT CCAATTACTC 
GACACTTCAG GGGAGCCAAT CAATCTGACC GGCGGCTTTA CTGGCGACGG CGACCTACAG 
CTGGAACCAA ATGCTTCTGA AGCGAGCGCG ACTTATACCG CGCGGTATTA CTCTACCGGG 
AAAGCAGAGG CTGGGACAGT CGCTGCCACC CTTCAATACG CCGTTTCGTA TAAATAA
 
Protein sequence
MSMKKYLAMI TGSLLVSSSA MAVSDNTITF QGEVSDETCS VVINGNQAKP VVLLPTVSTK 
DLSEQGKTAG PITFDIGLSG CTGSKDKTTK ISTVFVGNQV TSNGNLGNTG SAKNVEVQLL 
DTSGEPINLT GGFTGDGDLQ LEPNASEASA TYTARYYSTG KAEAGTVAAT LQYAVSYK