Gene SNSL254_A4954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4954 
Symbol 
ID6486703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4823942 
End bp4824613 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content43% 
IMG OID642740164 
Producthypothetical protein 
Protein accessionYP_002043838 
Protein GI194446391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.81268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGT TAAACGGCGG GAATGTGTAT CGTCCCACAG GGAAAGAAAA AAACCTGCAA 
GCCATTTTAA ATATTCATCG GCACGTTATT CAAAACATCT CCCCTGTCAC TATTACGGCC 
GGTAAAACAC TGGATATCAA GATTGATAAT CAATCCCACA TCCTGTTAAT CACTAAAGGC 
GCTATTAAAG TATGTCGGCG TATCGACAGC ATTGTAATGG GCTGCGGTGT CTCACCAATG 
ATTTTAGGCC TTGTAGATGC CTATGCTGAC TTATACCAGT TAGAAGAGAA TTCAGACGTC 
TTTTTTATCG CCGAAACCAC CTGTGAATAT TATCCTGTCC CAGTAAAAGA TTTTGTGGAA 
ATAGCCGATG AAAAGCATCT CTGGCGTGAC ATTTCGAACA TCCTGATGTA CCGCATTGCT 
TTCATGACTA ACCGTGACAG AAACCTTATC GGGCAGGACG CCTATAGCCA GATAAAAGCG 
CTGTTACTTG AACTGTGGTC GTATCCTGAA AGCTCACGAT TTGAGATCAA CGCACAGAAC 
TTCATACAGC AGAGAACCGG GCTTTCACGC AGCCGTATCA TGCAGGTACT TTCAGAACTA 
AAAGCGGGGG ACTATATAAA AATACTGCAT GGAAGACTGT TAGAGCTTCG AAACCTGCCG 
GTTTCATTTT AA
 
Protein sequence
MKQLNGGNVY RPTGKEKNLQ AILNIHRHVI QNISPVTITA GKTLDIKIDN QSHILLITKG 
AIKVCRRIDS IVMGCGVSPM ILGLVDAYAD LYQLEENSDV FFIAETTCEY YPVPVKDFVE 
IADEKHLWRD ISNILMYRIA FMTNRDRNLI GQDAYSQIKA LLLELWSYPE SSRFEINAQN 
FIQQRTGLSR SRIMQVLSEL KAGDYIKILH GRLLELRNLP VSF