Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4935 |
Symbol | |
ID | 6482232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4802672 |
End bp | 4803316 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642740145 |
Product | hypothetical protein |
Protein accession | YP_002043819 |
Protein GI | 194443877 |
COG category | [R] General function prediction only |
COG ID | [COG3726] Uncharacterized membrane protein affecting hemolysin expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 101 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGCG CAAAACTGAA ATTTCGGCTG CATCGTGCAG TCATTGTATT GTTCTGTCTC ACACTGCTCG TCGCGCTTAT GCAGGGCGCG TCCTGGTTTA GTCAAAACCA CCAGCGACAG CGCAACCCGC AGCTGGAAGA GCTGGCCCGC ACGCTGGCGC GCCAGGTGAC GCTCAACATC GCCCCGCTGA TGCGCAGCGA AACACCGGAT GAAAATCGCA TCAACGCCGT GCTGCGTCAG CTCACGCAAG AGAGCCGTAT TCTGGATGCC GGCGTCTATG ATGAACAGGG CGATCTTATT ACTCGCGCTG GCGAAAGCGT CAATGTGCGC GACAGGCTGG CGCTGGATGG CAAAAAAGCG GGCAGCTATT TTAACCAACA AATTGTCGAG CCTATCCAGG GGAAAAACGG CCCATTGGGC TACCTGCGTC TAACGCTGGA TACCCACACG CTGGCCACCG AAGCAAAGCA GGTCGATAAC ACCACCAACA TTCTACGCCT GATGCTGCTA CTCTCGCTGG CGATAGGCGT GGTGCTGACG CGCACCTTGC TACAAGGTAA ACGCACCCGC TGGCAGCAGT CGCCCTTCCT GCTAACGGCC AGCAAGCCTG TTCCGGAAGA GGAAGAGCGT GAGGAAAAAG AGTAA
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Protein sequence | MARAKLKFRL HRAVIVLFCL TLLVALMQGA SWFSQNHQRQ RNPQLEELAR TLARQVTLNI APLMRSETPD ENRINAVLRQ LTQESRILDA GVYDEQGDLI TRAGESVNVR DRLALDGKKA GSYFNQQIVE PIQGKNGPLG YLRLTLDTHT LATEAKQVDN TTNILRLMLL LSLAIGVVLT RTLLQGKRTR WQQSPFLLTA SKPVPEEEER EEKE
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