| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4923 |
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| Symbol | deoC |
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| ID | 6486092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4791604 |
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| End bp | 4792419 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642740134 |
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| Product | deoxyribose-phosphate aldolase |
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| Protein accession | YP_002043808 |
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| Protein GI | 194443455 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0274] Deoxyribose-phosphate aldolase |
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| TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.188116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAATTTT ATACGGCAAT GCCGTTGGAG AATGTCATGA CTGATTTAAA AGCAAGCAGC
CTGCGTGCGC TCAAACTGAT GGATCTGACC ACTCTGAACG ATGACGACAC CAATGAAAAA
GTGATCGCGT TGTGTCATCA GGCAAAAACC CCGGTCGGGA ATACGGCGGC GATTTGTATT
TACCCGCGTT TTATCCCGAT TGCGCGTAAA ACCCTCAAAG AACAAGGTAC GCCGGACATC
CGCATTGCAA CGGTGACTAA CTTCCCGCAT GGCAATGATG ACATCGATAT TGCGCTGGCG
GAAACCCGTG CGGCGATCGC CTACGGCGCT GACGAAGTGG ACGTGGTATT CCCGTACCGC
GCGTTGATCG CCGGTAACGA GCAGGTGGGT TTTGATCTGG TAAAAGCCTG TAAAGACGCT
TGTGCCGCAG CGAACGTATT GCTGAAAGTG ATTATCGAAA CCGGCGAGCT GAAAGAAGAG
GCGCTGATTC GTAAAGCCTC TGAAATCTCC ATTAAAGCCG GTGCGGATTT CATCAAAACC
TCTACCGGTA AAGTGCCGGT AAACGCTACG CCGGAAAGCG CGCGCATCAT GATGGAAGTG
ATCCGCGACA TGGGCGTTTC CAAAACCGTT GGCTTCAAAC CGGCGGGCGG CGTACGTACG
GCGGAAGACG CGCAGAAATT CCTCGCGATT GCAGACGAAC TGTTTGGCGC TGACTGGGCA
GATTCTCGTC ACTACCGCTT TGGCGCATCC AGCCTGCTGG CAAGCCTGCT GAAAGCGCTG
GGTCACGGCG ACGGTAAGAG CGCCAGCAGC TACTAA
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| Protein sequence | MKFYTAMPLE NVMTDLKASS LRALKLMDLT TLNDDDTNEK VIALCHQAKT PVGNTAAICI
YPRFIPIARK TLKEQGTPDI RIATVTNFPH GNDDIDIALA ETRAAIAYGA DEVDVVFPYR
ALIAGNEQVG FDLVKACKDA CAAANVLLKV IIETGELKEE ALIRKASEIS IKAGADFIKT
STGKVPVNAT PESARIMMEV IRDMGVSKTV GFKPAGGVRT AEDAQKFLAI ADELFGADWA
DSRHYRFGAS SLLASLLKAL GHGDGKSASS Y
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