Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4917 |
Symbol | osmY |
ID | 6482537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4786088 |
End bp | 4786705 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642740128 |
Product | periplasmic protein |
Protein accession | YP_002043802 |
Protein GI | 194444985 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.292031 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTATGA CAAGACTGAA GATTTCTAAA ACTCTGCTGG CCGTAATGTT GACCTCTGCT GTTGCGACAG GTTCTGCCTT TGCAGAAAAC GCAACAACGG ACAAGGCGCA AAGCGGAACC GAAACCGCAG GGCAAAAAGT CGATAGCTCT ATGAATAAAG TCGGTAACTT CATGGATGAC AGCGCCATCA CTGCGAAAGT AAAAGCTGCG CTGGTAGACC ATGACAATAT TAAAAGCACC GATATTTCTG TCGAAACCAA TCAGAAAGTC GTCACCCTGA GCGGCTTTGT AGAAAGCCAG GCGCAGGCTG AAGCCGCCGT GAAAGTGGCG AAAGGCGTAG AAGGCGTGAC CTCCGTTAGC GACAAACTTC ACGTTCGCGA CAATAAAGAA GGTTCCGTGA AAGGTTATGC CGGCGATACG GCCACGACCA GTGAAGTCAA AGCCAAGTTG CTGGCGGACG ATCTCGTCCC TTCCCGTAAA GTAAAAGTGG AAACGACCGA TGGCGTCGTA CAGCTCTCCG GTACCGTTGA AACTCAGGAA CAAAGCGACC GCGCTGAAAG CATCGCGAAA GCCGTTGATG GCGTAAAAAG TGTTAAAAAC GATCTGAAAG TTCAGTAA
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Protein sequence | MTMTRLKISK TLLAVMLTSA VATGSAFAEN ATTDKAQSGT ETAGQKVDSS MNKVGNFMDD SAITAKVKAA LVDHDNIKST DISVETNQKV VTLSGFVESQ AQAEAAVKVA KGVEGVTSVS DKLHVRDNKE GSVKGYAGDT ATTSEVKAKL LADDLVPSRK VKVETTDGVV QLSGTVETQE QSDRAESIAK AVDGVKSVKN DLKVQ
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