Gene SNSL254_A4917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4917 
SymbolosmY 
ID6482537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4786088 
End bp4786705 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content50% 
IMG OID642740128 
Productperiplasmic protein 
Protein accessionYP_002043802 
Protein GI194444985 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.292031 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATGA CAAGACTGAA GATTTCTAAA ACTCTGCTGG CCGTAATGTT GACCTCTGCT 
GTTGCGACAG GTTCTGCCTT TGCAGAAAAC GCAACAACGG ACAAGGCGCA AAGCGGAACC
GAAACCGCAG GGCAAAAAGT CGATAGCTCT ATGAATAAAG TCGGTAACTT CATGGATGAC
AGCGCCATCA CTGCGAAAGT AAAAGCTGCG CTGGTAGACC ATGACAATAT TAAAAGCACC
GATATTTCTG TCGAAACCAA TCAGAAAGTC GTCACCCTGA GCGGCTTTGT AGAAAGCCAG
GCGCAGGCTG AAGCCGCCGT GAAAGTGGCG AAAGGCGTAG AAGGCGTGAC CTCCGTTAGC
GACAAACTTC ACGTTCGCGA CAATAAAGAA GGTTCCGTGA AAGGTTATGC CGGCGATACG
GCCACGACCA GTGAAGTCAA AGCCAAGTTG CTGGCGGACG ATCTCGTCCC TTCCCGTAAA
GTAAAAGTGG AAACGACCGA TGGCGTCGTA CAGCTCTCCG GTACCGTTGA AACTCAGGAA
CAAAGCGACC GCGCTGAAAG CATCGCGAAA GCCGTTGATG GCGTAAAAAG TGTTAAAAAC
GATCTGAAAG TTCAGTAA
 
Protein sequence
MTMTRLKISK TLLAVMLTSA VATGSAFAEN ATTDKAQSGT ETAGQKVDSS MNKVGNFMDD 
SAITAKVKAA LVDHDNIKST DISVETNQKV VTLSGFVESQ AQAEAAVKVA KGVEGVTSVS
DKLHVRDNKE GSVKGYAGDT ATTSEVKAKL LADDLVPSRK VKVETTDGVV QLSGTVETQE
QSDRAESIAK AVDGVKSVKN DLKVQ