| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4912 |
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| Symbol | rsmC |
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| ID | 6486976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4781347 |
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| End bp | 4782375 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642740123 |
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| Product | 16S ribosomal RNA m2G1207 methyltransferase |
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| Protein accession | YP_002043797 |
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| Protein GI | 194444545 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00321391 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTT TTACCCCGGC AAGTGAAGTC TTGCTGCGCC ACAGTGATGA TTTCGAACAA
AGCCGTATTC TTTTTGCCGG AGATTTGCAG GATGACCTGC CCGCGCGCTT TGAATGCGCC
GCCAGCCGCG CGCATACGCA ACAGTTTCAC CACTGGCAGG TATTAAGCCG CCAGATGGGC
GATAACGTCC GTTTTAGCCT GGTCGCGCAA GCCAGCGATG TCGCTGACTG CGATACGCTG
ATCTACTACT GGCCGAAAAA TAAACCCGAA GCGCAGTTCC AGTTGATGAA TATTTTGTCG
CTGATGCCGT CGGGCAGCGA TGTTTTCGTC GTGGGGGAAA ACCGCAGCGG CGTGCGTAGC
GCCGAACAGA TGCTGGCGGA CTATGCGCCG CTGAACAAAG TAGATAGCGC GCGACGTTGC
GGCCTTTACC ATGGTCGTCT GGAAAAGCAG CCGCAGTTTA GTCTCGAATC CTGGTGGGCC
GAGTACAACA TCGACGGGCT GACCATCAAA ACATTGCCGG GCGTATTCAG CCGCGACGGA
CTGGATGTTG GTAGCCAACT GCTGCTGTCT ACGCTGACGC CGCACACCAA AGGTAAAGTG
CTGGATGTCG GCTGCGGCGC TGGCGTGCTT TCCGCCGCGC TGGCCAGCCA TTCGCCGAAA
GTGCGCCTGA CGCTGTGTGA CGTCAGCGCT CCGGCGGTGG AAGCCAGCCG CGCTACGCTT
GCCGCTAATG GTCTTGAAGG CGAGGTATTC GCCAGCAACA TCTTTTCGGA AGTCAAAGGA
CGTTTTGACA TGATCATCTC CAACCCGCCG TTCCACGACG GAATGCAAAC CAGCCTCGAT
GCGGCGCAAA CGCTCATTCG CGGCGCAGTG CGCCATCTGA ACAGCGGCGG AGAGTTACGC
ATCGTGGCGA ACGCCTTTCT GCCCTATCCT AAGATTCTGG ATGAGACTTT TGGCTTCCAT
GAAGTCATCG CGCAGACCGG GCGCTTTAAG GTTTATCGTA CCGTGATGAC CCGTCAGGCG
AAGAAATAG
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| Protein sequence | MSAFTPASEV LLRHSDDFEQ SRILFAGDLQ DDLPARFECA ASRAHTQQFH HWQVLSRQMG
DNVRFSLVAQ ASDVADCDTL IYYWPKNKPE AQFQLMNILS LMPSGSDVFV VGENRSGVRS
AEQMLADYAP LNKVDSARRC GLYHGRLEKQ PQFSLESWWA EYNIDGLTIK TLPGVFSRDG
LDVGSQLLLS TLTPHTKGKV LDVGCGAGVL SAALASHSPK VRLTLCDVSA PAVEASRATL
AANGLEGEVF ASNIFSEVKG RFDMIISNPP FHDGMQTSLD AAQTLIRGAV RHLNSGGELR
IVANAFLPYP KILDETFGFH EVIAQTGRFK VYRTVMTRQA KK
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