| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4907 |
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| Symbol | |
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| ID | 6482706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4779255 |
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| End bp | 4780181 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642740118 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002043795 |
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| Protein GI | 194445805 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0301785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGGA TAGTGGTCCT GAGCGTATTA CTGTTGATAT GGCATGGGAA ATATGGACAA
AAAAGAATTA ATCTCCCCTT TATCTCCCTA CTCTTTGGGG GAATATGGGC GGCGCATATT
GCGCTAAAGT ATCCAGCGTT AGGCCATTAT GATTTCTCTT TTTTACTGAT TTCCCTGCTT
AGCGTTCTGT TTATCGGCTC GATAGCCTTT GCCGCGAATA TCGTCGCGTT TACGCTCTAT
TCGCTACCGC CAGTCGCGGT CTGCCTGTGG CTGAACGGTA ATGAACAAGG TTTGCGAATT
CTCTATTTGC TGGCCCTGCC AATGGTGGGA ATCGCTATTC AACATGTTAT CCAGAAACGC
TACGATAATT TTGCCCAACA GCTCATGTTT AAGCTGCTGG CCGAGCGGGA AACCCTCAAT
GGCCTGAGTA TGCTTGATCC ATTAACCGGC TTATATAACC GCCGTGGCCT GCAAAATCGG
CTGGATACGT TACAGGCGCC GGGCAGCCAT GAACACTACG TCCTGCTATT GGATATCGAT
CATTTCAAAG CGTATAACGA TCACTACGGT CATATGATGG GCGATCAGGC GTTAATTCGC
GTCTCAGCGG CAATTCGGGA CGCCGTGCGA TCGCGCGATG TCGTCTGCCG TTTTGGCGGG
GAAGAATTTC TGGTGTTGCT GACCACCGCC GAACCACAGC AAGCCCGCGC TACCGCAGAA
CGTATCCGAC AGGAAGTATA CGATCTTAAA ATCCCGCATA TGTTTAACGA AAGCGTCGCC
ACCAATGTCA CTGTCAGTAT CGGCATTGCG CCCCTGACGG ATCGCAATAT CGGAGACGCT
ATCGAAAAAG CGGATAAAGC GCTCTACGAA GCCAAGCATC TTGGACGTAA CCACATTCTG
GTCAGCGACG ACATGCGCGC CCTATGA
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| Protein sequence | MIGIVVLSVL LLIWHGKYGQ KRINLPFISL LFGGIWAAHI ALKYPALGHY DFSFLLISLL
SVLFIGSIAF AANIVAFTLY SLPPVAVCLW LNGNEQGLRI LYLLALPMVG IAIQHVIQKR
YDNFAQQLMF KLLAERETLN GLSMLDPLTG LYNRRGLQNR LDTLQAPGSH EHYVLLLDID
HFKAYNDHYG HMMGDQALIR VSAAIRDAVR SRDVVCRFGG EEFLVLLTTA EPQQARATAE
RIRQEVYDLK IPHMFNESVA TNVTVSIGIA PLTDRNIGDA IEKADKALYE AKHLGRNHIL
VSDDMRAL
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