Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4899 |
Symbol | |
ID | 6486596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4773741 |
End bp | 4774280 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642740110 |
Product | primosomal protein DnaI |
Protein accession | YP_002043787 |
Protein GI | 194444841 |
COG category | [R] General function prediction only |
COG ID | [COG5529] Pyocin large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.541302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCCA GAATTTTAAC GTCGGACGTC ATCGGTATTG ACGTCCTTTT ACACGATCAT CATGCTGTGC TGGCGAAGTC AACGGGCGGC GCAGTGGCGG TATTCGCTAA TAATGCGCCT GCCTTTTATG CCGTGACGCC TGCACGCATG GCTGAACTGC TGGCGCTTGA AGAAAAGTTA TCACGTCCGG GAAGCGATGT GGCGTTAGAC GCGCAATTTT ACGAAGAACC CGAAGCCGCC CCCGTTGCGA TTCCCTGCGG AAAATTCGCC ATGTATCCCG CCTGGCAACC GGATGCGGAT TTTCAGCGTC AGGCTGCCCT TTGGGGCGTG GCGCTTCGGG AGCCGGTCAC CGCAGAAGAG CTGGCGGCGT TTATCGCCTA CTGGCAGGCG GAAGGTAAGG TTTTTCACCA TATCCAGTGG CAGCAAAAGC TGGCGCGCAG CGTGCAAATC AGCCGTTCCA GCAATGGCGG AATGCCGCAG CGCGACATCA ATAGCGTCAG CGAACCTGAC AATCATATTC CACCAGGTTT TAGGGGGTAA
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Protein sequence | MSSRILTSDV IGIDVLLHDH HAVLAKSTGG AVAVFANNAP AFYAVTPARM AELLALEEKL SRPGSDVALD AQFYEEPEAA PVAIPCGKFA MYPAWQPDAD FQRQAALWGV ALREPVTAEE LAAFIAYWQA EGKVFHHIQW QQKLARSVQI SRSSNGGMPQ RDINSVSEPD NHIPPGFRG
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