Gene SNSL254_A4899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4899 
Symbol 
ID6486596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4773741 
End bp4774280 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content56% 
IMG OID642740110 
Productprimosomal protein DnaI 
Protein accessionYP_002043787 
Protein GI194444841 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.541302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCCA GAATTTTAAC GTCGGACGTC ATCGGTATTG ACGTCCTTTT ACACGATCAT 
CATGCTGTGC TGGCGAAGTC AACGGGCGGC GCAGTGGCGG TATTCGCTAA TAATGCGCCT
GCCTTTTATG CCGTGACGCC TGCACGCATG GCTGAACTGC TGGCGCTTGA AGAAAAGTTA
TCACGTCCGG GAAGCGATGT GGCGTTAGAC GCGCAATTTT ACGAAGAACC CGAAGCCGCC
CCCGTTGCGA TTCCCTGCGG AAAATTCGCC ATGTATCCCG CCTGGCAACC GGATGCGGAT
TTTCAGCGTC AGGCTGCCCT TTGGGGCGTG GCGCTTCGGG AGCCGGTCAC CGCAGAAGAG
CTGGCGGCGT TTATCGCCTA CTGGCAGGCG GAAGGTAAGG TTTTTCACCA TATCCAGTGG
CAGCAAAAGC TGGCGCGCAG CGTGCAAATC AGCCGTTCCA GCAATGGCGG AATGCCGCAG
CGCGACATCA ATAGCGTCAG CGAACCTGAC AATCATATTC CACCAGGTTT TAGGGGGTAA
 
Protein sequence
MSSRILTSDV IGIDVLLHDH HAVLAKSTGG AVAVFANNAP AFYAVTPARM AELLALEEKL 
SRPGSDVALD AQFYEEPEAA PVAIPCGKFA MYPAWQPDAD FQRQAALWGV ALREPVTAEE
LAAFIAYWQA EGKVFHHIQW QQKLARSVQI SRSSNGGMPQ RDINSVSEPD NHIPPGFRG