Gene SNSL254_A4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4893 
Symbol 
ID6485839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4766825 
End bp4767673 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content50% 
IMG OID642740104 
Productfructose permease iid component 
Protein accessionYP_002043781 
Protein GI194444555 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AGATGATTTC TGATAAAGAC CGCCAGCAGG CGGAAACCAC TGGTCTGGTC 
ACCGCGCGTG ATTTACGCCG CGTCTTCTGG CGGTCATTCC AGATGGAGTT TTCCTGGAAC
TATGAACGAC AAATGAACCT GGCGTTCGTC TATACGCTCA TTCCGGTATT AAAGAAACTG
TATAGCCGAA AAGAAGATCT TGCCGAAGCG CTAAAACGCC ATCTGGCTTT CTTTAATACC
ACGCCGCACA TTGTGACGTT GATCCTCGGT ATTACCGTGG CGATGGAGGA GAAAAATAGC
CAGCAGAAAG AGATGGACGC CAGTTCTATC GATAACGTCA AAGCGTCGTT AATGGGGCCG
CTGGCGGGTA TTGGCGACTC TTTTTTCTGG GGAACATTGC GTCTTATCGC CACTGGCATC
GGTACCAGTC TGGCGCTGAA AGGCAATATT CTGGGGCCGA TTTTATTTCT GCTGGTGTTT
AACGTACCGC ATATTCTGGC CCGCTGGTTC TTTACCCGCT GGGGCTATGT GCTGGGAACC
GGCGTACTGC AACGCATTCA GCAAAGCGGA ATGATGGAAA GCCTAACCTA TGGCGCCTCG
ATTATCGGTC TGATGGTGGT TGGCGCGATG ACGGCCTCCA TGATTGATAT CACCATTCCC
ATTACGTTTG GTACGGGAGA GGCGAAAACC CATGTTCAGG ACATTATTAA CGACATCATG
CCTTGTCTGC TGCCGTTAAT TAGCTTCGCC ATTGTGTACT GGCTGTTAGG GAAAAAAGTG
AAACCGTTAA CCATCATTGG CGGTATAGCG CTGGTGGGAA TTTTCGGTTC CTGGATAGGG
TTATTTTAA
 
Protein sequence
MTMKMISDKD RQQAETTGLV TARDLRRVFW RSFQMEFSWN YERQMNLAFV YTLIPVLKKL 
YSRKEDLAEA LKRHLAFFNT TPHIVTLILG ITVAMEEKNS QQKEMDASSI DNVKASLMGP
LAGIGDSFFW GTLRLIATGI GTSLALKGNI LGPILFLLVF NVPHILARWF FTRWGYVLGT
GVLQRIQQSG MMESLTYGAS IIGLMVVGAM TASMIDITIP ITFGTGEAKT HVQDIINDIM
PCLLPLISFA IVYWLLGKKV KPLTIIGGIA LVGIFGSWIG LF