Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4882 |
Symbol | |
ID | 6483858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4752855 |
End bp | 4755284 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642740093 |
Product | type I restriction enzyme EcoEI R protein |
Protein accession | YP_002043770 |
Protein GI | 194443594 |
COG category | [V] Defense mechanisms |
COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTGACC TGAACCTGAG TACCCTGACG GAAGCAGACA TCATCACCAA ACGCGTTATG CCCGCCATCC TGAAAGCTGG CTGGGATAAC ACAACTCAAA TCCGACAGGA AGTCAAACTC CGGGACGGTA AGGTCATCGT GCGCGGCAAA GTCGCGGCGC GTAGAACGGT GAAATCTGCC GATATCGTGC TGTACCACAA ATTAAACATG CCGCTGGCGG TGATCGAAGC TAAAGCCAAT AAACATGAAA TCGGCAAAGG TATGCAGCAG GCGCTGGGTT ATGCGCACCT GCTGGACGTT CCTTTCGTCT TCGCTACCAA TGGCGATGGC TTTATCTTCC ATGATAAAAC GGCAACCGGC GCGATTGAGC GAGAAATTAC CCTCGACGAA TTCCCAACGC CTGATGAATT GTGGCAAAAA TACTGCCAGT GGAAAGGGTA CACCGCCGCG CAAATGCCGA TCGTCACCCA GGATTATTAC AACGACGGCA GCGAAAAGCG GCTGCGCTAC TACCAGCTTC AGGCCATCAA CAAAACGCTG GAGGCTGTGT CTAACGGGCA AAACAGATTA TTACTGGTCA TGGCGACAGG AACCGGTAAA ACGCTGACGG CGTTTCACAT CATCTGGCGT TTATGGCGGT CAGGCGTTAA AAAACGCATC CTGTTCCTGG CAGACCGAAA CGTCCTTGTT GACCAGACCC GACTTGATGA CTTTCAGCCT TTCGGCTCCG CAATGACCAA AATCACCGGG CGCACTCTCG ACCCCGCTTT CGAAATCCAT CTTGCGCTCT ATCAGGCGTT AACCGGCAAT GAAGAGCATC AAAAAGCGTT TAAGCAGGTT TCGCCGGATT TCTTTGATCT GATTATCATC GACGAATGCC ACCGAGGCAG CGCCTCTGAA GACAGCGCCT GGCGTGAAAT TCTGGATTAT TTCAGCTCCG CCACACAGAT TGGTATGACC GCCACGCCGA AGGAAACTCA CGAGGTCTCC AATAGCGACT ACTTTGGCGA TCCTATTTAC ACTTATTCGT TGAAAGAAGG GATCGAGGAC GGATTCCTCG CTCCTTACAA AGTGGTTCGT GTCGATATTG ATGTTGATTT ACAAGGCTGG CGACCCGTGC GCGGCCAGAG CGACCTCAAC GGTGAACTGA TCGATGACAG AATCTATAAC CAGAAAGATT TCGACCGCAC GATGGTCATC GACGAGCGGA CTGAACTGGT GGCGAAAACC ATTACCGATT ACCTCAAACG CACCAATCCG ATGGATAAAA CCATCGTGTT TTGCGAAGAC ATTCCGCATG CTGAACGTAT GCGCCGGGCG CTGATCAACC TCAACCCGGA GATGGTAAAA CGTAACGATA AATATGTGAT GAAAATCACC GGGGATGACG AAGAAGGGAA AGGCCAGCTG CAGAATTTCA GCGACAAGAA AAAAGAATGG CCGGTGATTG TGACCACCTC AGAACTCATG ACTACTGGCG TAAACGTTAA GACCTGCAAA CTGATCGTGC TGGACCAAAC CATCCGCTCA ATGACTAAAT TTAAACAGAT CATTGGCCGG GGTACCCGCA TCGAACAAGA CTACGGCAAA CTGTGGTTCA CCATTCTTGA TTTCAAAAAG GCCACTGAAC TGTTTGCCGA CGAGCGCTTT GACGGTATCC CGGAAAAAGT GATGGAAGCC ACGCCAGATG ACATTTCGGA CCCGGACTCC GGCTTCAACG AAACGCTGGA GGAAGAAACG CCTGACGTCT TTGCCGACGA GGATATCAAC GGGGCAGACG AAGATCCGGC CACCTACACC ACCAGCACGA TGGGCGGCTC CGGCCCGTTA CCGGAAGAGG AAGACAACCG GGTCCGTAAA TTTCACATTA ACGGCGTCAC CGTTGGTGTG GTCTCGCAAC GCGTCCAGTA TTACGACGCC GACGGCAGGC TGGTCACCGA ATCCTTCAAA GATTACACCC GCAAAACCGT GCTCAAAGAG TGCGCCTCAC TGGATGATTT TGTCCGGAAA TGGCAAGATG CTGACCGCAA AGCGGCGGTG ATCAAAGAGC TCGAATTACA GGGCATCCTT TGGGATGTTC TGGCGGAAGA GGTGGGCAAA GATCTTGACC CGTTCGACAT GCTCTGTCAT GTGGTGTATG GTCAGCCGCC GCTCACGCGC AAAGAGCGCG CAGACAATGT TCGCAAGCGT AATTATTTCA CCAAATATTC CGATGCCGCG CAGACTGTAC TCAGCAATTT GCTGGACAAA TATGCCGATG CGGGCGTGGA AGAAATCGAG AATATTCAGG TGCTGAAGCT CAAACCGTTC GACCAGATGG GCACTCTGCA GGAGATCATC ACCGACGGCT TTGGTGACAA AGGCACCTAT ATGCAGGCAG TGAGTGACCT GGAAAGCGAA ATTTACCAGC TTCCTCCCCG CTCCGCCTGA
|
Protein sequence | MADLNLSTLT EADIITKRVM PAILKAGWDN TTQIRQEVKL RDGKVIVRGK VAARRTVKSA DIVLYHKLNM PLAVIEAKAN KHEIGKGMQQ ALGYAHLLDV PFVFATNGDG FIFHDKTATG AIEREITLDE FPTPDELWQK YCQWKGYTAA QMPIVTQDYY NDGSEKRLRY YQLQAINKTL EAVSNGQNRL LLVMATGTGK TLTAFHIIWR LWRSGVKKRI LFLADRNVLV DQTRLDDFQP FGSAMTKITG RTLDPAFEIH LALYQALTGN EEHQKAFKQV SPDFFDLIII DECHRGSASE DSAWREILDY FSSATQIGMT ATPKETHEVS NSDYFGDPIY TYSLKEGIED GFLAPYKVVR VDIDVDLQGW RPVRGQSDLN GELIDDRIYN QKDFDRTMVI DERTELVAKT ITDYLKRTNP MDKTIVFCED IPHAERMRRA LINLNPEMVK RNDKYVMKIT GDDEEGKGQL QNFSDKKKEW PVIVTTSELM TTGVNVKTCK LIVLDQTIRS MTKFKQIIGR GTRIEQDYGK LWFTILDFKK ATELFADERF DGIPEKVMEA TPDDISDPDS GFNETLEEET PDVFADEDIN GADEDPATYT TSTMGGSGPL PEEEDNRVRK FHINGVTVGV VSQRVQYYDA DGRLVTESFK DYTRKTVLKE CASLDDFVRK WQDADRKAAV IKELELQGIL WDVLAEEVGK DLDPFDMLCH VVYGQPPLTR KERADNVRKR NYFTKYSDAA QTVLSNLLDK YADAGVEEIE NIQVLKLKPF DQMGTLQEII TDGFGDKGTY MQAVSDLESE IYQLPPRSA
|
| |