Gene SNSL254_A4877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4877 
Symbol 
ID6486668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4746110 
End bp4747030 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content49% 
IMG OID642740088 
Producttransporter 
Protein accessionYP_002043765 
Protein GI194445938 
COG category[S] Function unknown 
COG ID[COG3586] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.771839 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.793173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA TCCAGCTTTT CCGCCTCGGT GGCGGGAAAG TACAAGAACT GCCGGGCAAA 
GCTGCAGCCA TTGAAAAAGA TCTGCAAATG CTGATCGAAT CCCATATGGA AACGTTCCTT 
GGCGTCCGCT TTCTCGAGAC CGAATACCGC ACGGGTAAAA CCCATCGTGG GCGAATTGAT 
TCCCTCGGCC TCGACGAAAA TAACTGCCCG GTGATTATTG AATATAAACG CCACAGCAAT 
GAAAACGTCA TTAACCAGGG GCTCTTTTAT CTCGACTGGC TACTCGATCA TAAAGCGGAA 
TTTCAGTTGC TGGTGATGGA AAAAATAAGT AAAACCGCGG CCAAAGCCAT TGACTGGTCC 
GGCACACGGT TAATCTGTAT TGCCGCCGAT TTTAATAAAT ACGACGAACA TGCCGTTCAG 
CAAATCAACC GCAATATCAA CCTGATTCGC TACAAGCTTT TTGCCGACGA CCTGTTAATG 
CTGGAACTGG TTAACGCCGT GGTCGAAAAT AGCCCTCAGT ACATCATCGC GAACGGTTCC 
GTCAGCAGCG GTAAACGCCA TACCCGCACG CAGCGCGAAC AGCTCTCTTT GGCCTCTCCC 
GCGCTGCTTT CATTATATGA ACAGCTAAAA AGTTATGTGC TGTCACTCAG TGATGAGGTT 
CAGTTTAAAG AGCTTAAGCT CTATGACGCC TTCCGCCTCA TTCGCAACTT TCTGTGCGTA 
GCCGTTTATC CCGTGACCGA CCCACACCTA CGCCTGTGGC TGAAAATTAA TCCACAGCAT 
ATCCAGCTTG AAGAAGGATT TAGCCGGGAC GTCACGCATA TTGGCCACTG GGGAACCGGC 
GACGTCGAAT TGATTGTGCG TAACGAACAC GATCTGGATA AAGCCAAACT GCTGATCGAG 
AAAGCCTGGC AGGAAAATTA G
 
Protein sequence
MSDIQLFRLG GGKVQELPGK AAAIEKDLQM LIESHMETFL GVRFLETEYR TGKTHRGRID 
SLGLDENNCP VIIEYKRHSN ENVINQGLFY LDWLLDHKAE FQLLVMEKIS KTAAKAIDWS 
GTRLICIAAD FNKYDEHAVQ QINRNINLIR YKLFADDLLM LELVNAVVEN SPQYIIANGS 
VSSGKRHTRT QREQLSLASP ALLSLYEQLK SYVLSLSDEV QFKELKLYDA FRLIRNFLCV 
AVYPVTDPHL RLWLKINPQH IQLEEGFSRD VTHIGHWGTG DVELIVRNEH DLDKAKLLIE 
KAWQEN