Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4872 |
Symbol | |
ID | 6483107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4741440 |
End bp | 4742681 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642740083 |
Product | multidrug resistance protein MdtM |
Protein accession | YP_002043760 |
Protein GI | 194442469 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.891982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGGA TTATTCAGTT TTTCTCCCAA CGCGCCACAA CGTTATTTTT CCCGATGGCG CTGATTTTGT ACGATTTTGC CGCCTATCTG ACGACGGATC TGATTCAGCC TGGCATCATT AACGTCGTGC GCGATTTTAA TGCTGACGTC AGTCTTGCGC CGGCCTCGGT CAGTCTCTAT CTGGCGGGCG GAATGGCGTT GCAATGGCTT CTGGGGCCGC TATCCGACAG GATTGGCCGC CGGCCAGTGC TGATTGCAGG GGCATTAATT TTTACTCTCG CCTGCGCGGC AACGCTGTTG ACGACCTCAA TGACGCAGTT TCTGGTTGCC CGTTTTGTGC AGGGCACCAG CATTTGCTTT ATCGCAACGG TCGGCTACGT CACGGTACAG GAGGCCTTCG GTCAAACCAA AGCCATTAAG CTGATGGCGA TTATTACCTC CATTGTGCTG GTCGCTCCGG TTATCGGCCC GCTCTCCGGC GCCGCGCTGA TGCACTTCGT TCACTGGAAG GTACTGTTCG GTATTATTGC GGTGATGGGG CTGTTGGCGT TGTGCGGCCT GCTGCTGGCG ATGCCAGAAA CGGTGCAACG CGGCGCGGTG CCGTTCAGCG CGGTGAGCGT ACTGCGCGAT TTTCGTAATG TGTTTCGCAA CCCGATTTTT CTCACCGGGG CGGCGACGCT GTCGTTGAGC TACATCCCGA TGATGAGCTG GGTGGCGGTG TCACCGGTGA TCCTGATCGA TGCCGGCGGG ATGAGTACTT CGCAATTCGC CTGGGCGCAG GTGCCCGTAT TCGGCGCGGT GATCGTGGCC AATATGATCG TTGTGCGCCT GGTGAAAGAT CCGACCCGAC CGCGTTTTAT CTGGCGCGCC GTACCAATCC AGTTAAGCGG GCTGGCAACA TTGCTTCTCG GTAATCTTCT TCTGCCGCAC GTCTGGCTTT GGTCTGTGCT GGGCACCAGC CTGTACGCGT TCGGCATTGG CATGATTTTC CCGACGCTGT TTCGCTTCAC GCTTTTCTCC AACAACTTGC CAAAAGGGAC GGTTTCAGCC TCGCTGAACA TGGTGATTCT GACGGTGATG GCGGTGTCGG TCGAAGTTGG CCGCTGGCTG TGGTTTCACG GCGGGAGACT GCCGTTTCAC CTGCTGGCAG CGGTGGCCGG GGTGATTGTG GTCTTCACTC TGGCGACACT ATTACAGCGC GTGCGCCAGC ATGAGGCGGC AGAACTGGCC GCTGAGAAGT AA
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Protein sequence | MQRIIQFFSQ RATTLFFPMA LILYDFAAYL TTDLIQPGII NVVRDFNADV SLAPASVSLY LAGGMALQWL LGPLSDRIGR RPVLIAGALI FTLACAATLL TTSMTQFLVA RFVQGTSICF IATVGYVTVQ EAFGQTKAIK LMAIITSIVL VAPVIGPLSG AALMHFVHWK VLFGIIAVMG LLALCGLLLA MPETVQRGAV PFSAVSVLRD FRNVFRNPIF LTGAATLSLS YIPMMSWVAV SPVILIDAGG MSTSQFAWAQ VPVFGAVIVA NMIVVRLVKD PTRPRFIWRA VPIQLSGLAT LLLGNLLLPH VWLWSVLGTS LYAFGIGMIF PTLFRFTLFS NNLPKGTVSA SLNMVILTVM AVSVEVGRWL WFHGGRLPFH LLAAVAGVIV VFTLATLLQR VRQHEAAELA AEK
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