Gene SNSL254_A4871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4871 
Symbol 
ID6482575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4740082 
End bp4741353 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID642740082 
Producthypothetical protein 
Protein accessionYP_002043759 
Protein GI194442966 
COG category[S] Function unknown 
COG ID[COG2733] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.633189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA TCGCCGAACT CAAACGCGCC AAACGCCTGG CGCTCTCACT GTTGCTGATA 
GCCGCCGCGA CGTTTGTGAC CACGCTTTTC CTGCCGCCCA GTTTTTGGGT GCTGGGCGTA 
AAAGCAATTG CCGAAGCGGC GATGGTTGGC GCGCTGGCGG ACTGGTTTGC CGTGGTGGCG 
CTGTTTCGCC GCATTCCCAT TCCGTTTATT TCACGACATA CGGCGATTAT TCCCCGTAAT 
AAAGACCGAA TCGGCGAAAA TCTTGGGCAA TTTGTGCAGG AGAAGTTCCT TGATACGCAG 
TCGCTGATCG CGCTAATCCG CCGCCATGAA CCCGCGCTGC TTATCGGAAA CTGGTTCAGC 
CAGCCGGACA ACGCCAGCCG GGTCGGGCAG CATCTGCTGC AAATTATGAG CGGCTTTCTG 
GAACTGACCG ATGACGCCCG TATTCAGCGG CTGCTCAAGC GAGCGGTGCA TAAGGCGATT 
GATAAAGTGG ATCTTTCCGG CACCAGCGCC CTGATGCTGG AAAGCATGAC CAAAAACGAT 
CGTCACCAGG AGTTACTCGA TACGCTGATC GCCCAGCTTA TCGCCCTGTT ACAGCGTGAC 
AGCTCCCGAA CATTTATCGC CAGACAGATC ATACGCTGGC TAGAGACCGA ACATCCGTTA 
AAAGCGAAGA TTCTGCCGAC CGAATGGCTG GGAGAACACA GCGCTGAACT GGTCTCCGAC 
GCGGTAAATT CTCTGCTGGA TGATATCAGT CACGACCGCG CGCATCAGAT TCGTCATGCC 
TTCGATCGCG CGACGTATAA GCTGATCGAT AAACTTAAAC ATGATCCGGA AATGGCTGCC 
CGGGCAGAAA ACATTAAAAG TTACCTGAAG GAAGATGAGG CGTTTAACCG TTATCTCGGC 
GAGATCTGGG CGGATCTACG CCAGTGGTTA AAAACAGATA TCAACGCCGA AGACTCGAAG 
GTGAAGCAGC GCATCGCTCA TGCCGGACAA TGGTTTGGCG AGACGCTTAT CGCCGACGAC 
GCATTACGCG CTTCGCTTAA CGGTCATCTG GAACAGGCCG CGCACCGCGT CGCGCCGGAA 
TTCGCCGCCT TCCTGACGCG CCACATCAGC GATACCGTAA AAGGCTGGGA TGCGCGCGAT 
ATGTCGCAGC AGATTGAGCT TAATATCGGT AAAGATTTGC AGTTTATCCG CGTGAACGGC 
ACGCTGGTCG GCGGCGCTAT CGGTCTGGTG TTATATTTAC TGTCGCAAAT ACCGGCACTG 
CTCAGTATCT AA
 
Protein sequence
MNKIAELKRA KRLALSLLLI AAATFVTTLF LPPSFWVLGV KAIAEAAMVG ALADWFAVVA 
LFRRIPIPFI SRHTAIIPRN KDRIGENLGQ FVQEKFLDTQ SLIALIRRHE PALLIGNWFS 
QPDNASRVGQ HLLQIMSGFL ELTDDARIQR LLKRAVHKAI DKVDLSGTSA LMLESMTKND 
RHQELLDTLI AQLIALLQRD SSRTFIARQI IRWLETEHPL KAKILPTEWL GEHSAELVSD 
AVNSLLDDIS HDRAHQIRHA FDRATYKLID KLKHDPEMAA RAENIKSYLK EDEAFNRYLG 
EIWADLRQWL KTDINAEDSK VKQRIAHAGQ WFGETLIADD ALRASLNGHL EQAAHRVAPE 
FAAFLTRHIS DTVKGWDARD MSQQIELNIG KDLQFIRVNG TLVGGAIGLV LYLLSQIPAL 
LSI