Gene SNSL254_A4870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4870 
Symbol 
ID6484844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4738678 
End bp4739862 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content56% 
IMG OID642740081 
Productmajor facilitator family protein 
Protein accessionYP_002043758 
Protein GI194442452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.444375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCATG CTCAGAGCGC TTCACCTCGC CATCCCATTT TTACGGCGCT TTTCGGTATG 
ATGGTATTGA CGCTGGGGAT GGGAGTTGGC CGCTTTCTGT ATACGCCCAT GCTGCCAGTA 
ATGCTGGCGG AAAAGCAGCT AACGTTTAAC CAACTCTCCT GGATTGCCAG CGCCAATTAT 
GCAGGGTACC TGGCGGGAAG CTTACTGTTT TCCTTTGGCC TTTTTCATCT TCCCTCTCGT 
CTACGCCCCA TGCTGCTGGC TTCGGCGGTC GCCACCGGTA TTCTTATTCT GTCTATGGCG 
ATATTTACTC AGCCCGCGGT CGTCATGTTG GTGCGCTTAC TGGCAGGTGT CGCGAGCGCG 
GGAATGATGA TTTTTGGATC AATGATTGTG TTGCATCATA CCCGCCATCC GTTTGTGATC 
GCCGCGCTCT TTTCCGGCGT CGGGGCCGGG ATTGCACTGG GCAACGAATA TGTCATTGGC 
GGTTTACATT ATGCGCTTTC GGCCCATTCG CTATGGCTGG GGGCCGGAGC GCTCGCCGGT 
ATATTGCTAT TAATCGTGGC AATGTTGATT CCCCCCCGCG CTCATGCGCT GCCGCCTGCG 
CCCTTAGCAA GAATCGAAAA TCAGCCTATG CCCTGGTGGC AACTGGCGCT GTTGTACGGT 
TTCGCCGGAT TCGGCTACAT CATTGTCGCT ACCTATTTGC CGCTGATGGC GAAAAGCGCG 
GGCTCTCCAC TACTCACGGC GCACCTTTGG TCGTTGGTCG GCCTAGCGAT CATTCCCGGC 
TGCTTCGGCT GGCTGTGGGC GGCAAAACAT TGGGGCGTCC TGCCATGCCT GACCGCGAAC 
CTGTTGATCC AGAGCGCCTG CGTGCTGCTG TCTCTCGCCA GCGACTCATT GTTGCTGTTA 
ATACTGAGCA GTATTGGTTT TGGCGCCACG TTTATGGGCA CAACCTCGCT GGTGATGCCG 
CTTGCCCGAC AACTCAGCGC GCCGGGTAAT ATTAATTTGT TAGGCCTGGT GACGCTAACG 
TATGGTATTG GGCAAATTCT CGGTCCGCTC GCCGCCAGTC TGTCAGGCAA TGGCGCGTCG 
ACAATTATCA ACGCCACGCT TTGCGGCGCC GCGGCGCTCT TTTTTGCCGC GCTGATCAGC 
GCCGCGCAGC AGATAAAACA AAAACGGTTT GTGATACGTG AATAA
 
Protein sequence
MVHAQSASPR HPIFTALFGM MVLTLGMGVG RFLYTPMLPV MLAEKQLTFN QLSWIASANY 
AGYLAGSLLF SFGLFHLPSR LRPMLLASAV ATGILILSMA IFTQPAVVML VRLLAGVASA 
GMMIFGSMIV LHHTRHPFVI AALFSGVGAG IALGNEYVIG GLHYALSAHS LWLGAGALAG 
ILLLIVAMLI PPRAHALPPA PLARIENQPM PWWQLALLYG FAGFGYIIVA TYLPLMAKSA 
GSPLLTAHLW SLVGLAIIPG CFGWLWAAKH WGVLPCLTAN LLIQSACVLL SLASDSLLLL 
ILSSIGFGAT FMGTTSLVMP LARQLSAPGN INLLGLVTLT YGIGQILGPL AASLSGNGAS 
TIINATLCGA AALFFAALIS AAQQIKQKRF VIRE