| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4866 |
|---|
| Symbol | |
|---|
| ID | 6482401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4734466 |
|---|
| End bp | 4735374 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642740077 |
|---|
| Product | putative DNA-binding transcriptional regulator |
|---|
| Protein accession | YP_002043754 |
|---|
| Protein GI | 194445555 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.424188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 0.514626 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTAA CTGGAGCAGG TTTGCACAAT ATTGAGACAA AATGGCTATA TGATTTTCTG
ACACTGGAAA AGTGCCGCAA TTTCTCTCAG GCCGCCATTA TCCGCAACGT ATCGCAACCC
GCTTTTAGCC GGCGGATTCG CGCCCTGGAA CATGCCGTGG GCGTTGAACT GTTTAACCGA
CAGGTCTCGC CGCTACAGCT TTCCGAACAG GGTAAAATCT TTCACTCCCA GGTTCGCCAC
CTGTTACAGC AGCTGGAAAG TAATCTGACC GAACTGCGCG GCGGCAGCGA TTATACGCTG
CGTAAAATCA AGATTGCCGC CGCCCACTCG CTCTCCCTCG GCCTGTTGCC GACCATCGTT
AAGCAGATGC CGACGCAGTT TACCTACGCC GTTGAGGCGA TAGATGTCGA CCAGGCGGTG
GATATGTTAC GTGAGGGGCA AAGCGATTTT ATCTTTTCCT ATCACGATGA AAACCTGCAA
CAAGCGCCGT TTGATAATAT CCGCCTGTTT GAGTCGAGAC TGTTTCCGGT TTGCGCCAAC
AATGGCCGGG GCGAGCCACG CTATACGCTT GAGCAGCCGC ACTTTCCCCT GCTTAATTAC
AGTCAGAACT CCTATATGGG CCGGCTGATA AATCGTACTC TGACTCGCCA TGCTGAACTG
AGTTTCAGTA CATTTTTCGT CTCTTCGATG AGTGAATTGT TAAAACAGGT TGCGATGGAC
GGCTGCGGAA TCGCCTGGTT GCCCGAGTAT GCTATCCGTC AGGAGATTAC CGACGGACGC
CTGATAGTGC TTGATGCCGA CGAACTGGTT ATTCCGATCC AGGCTTATGC TTATCGCATG
AATACCCGCA TGAGTCAGGT AGCCGAAACA TTTTGGCGCG ACCTGCGTGG GCTTCAGGCC
GCGCTGTAA
|
|---|
| Protein sequence | MDVTGAGLHN IETKWLYDFL TLEKCRNFSQ AAIIRNVSQP AFSRRIRALE HAVGVELFNR
QVSPLQLSEQ GKIFHSQVRH LLQQLESNLT ELRGGSDYTL RKIKIAAAHS LSLGLLPTIV
KQMPTQFTYA VEAIDVDQAV DMLREGQSDF IFSYHDENLQ QAPFDNIRLF ESRLFPVCAN
NGRGEPRYTL EQPHFPLLNY SQNSYMGRLI NRTLTRHAEL SFSTFFVSSM SELLKQVAMD
GCGIAWLPEY AIRQEITDGR LIVLDADELV IPIQAYAYRM NTRMSQVAET FWRDLRGLQA
AL
|
|---|
| |