Gene SNSL254_A4841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4841 
Symbol 
ID6482834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp4715934 
End bp4716686 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content49% 
IMG OID642740054 
Productputative capsid morphogenesis protein encoded in CP-933I 
Protein accessionYP_002043731 
Protein GI194444227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.101238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.153291 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACTG TTAACCAGAT CCCTGATGCA AACATTACAC CCTCCCTCCC ACCGAAAATT 
CGCGAAGCGG TGGATAAAGT TAAGGTAGCA AAAGCTGTCT GGCAGGAAGA ACGGCGAAAA 
CAAACTGAAG CTGCTGCAAT GATTGAAACT ATCCGTAAAC GTCAGGAAGA TACAAAAACG 
GAAACGCAGG CGCTTAATGA TGAATGGCGA AACCTGTTTC GTGAGAATCA GGGAAATATG 
ACGCCACGCA TGAAAAAACT GCGGGCAGAA ATCGCCCTCG GACGCGAAAC ACTGGATGAG 
TTCGAAGATT TGCTGGCAGC TCAGGCGGCA GAAAATGAAT TCCTGCCCTG GAAAACTGCG 
GATGCTGCAA ACCACTACAT CAGTGAGCAT AATCGCCTGA TTGAAACTCA TGCAGTGTGG 
CTCTGGAATG AGTTTATGAA GGAACACGGC CAGAAACTTA TTCAGATCCT TGGACTGCTG 
AAAATGACTC TGGGCCGAAG CGCTTCTGCT GTTATCGGTG TAGTTCATAC CGTAAACGAC 
CCCGAAAGTG TGCTGAAGCA ATTTATCAGC GAGCAACTCA CCACTCCGGC ACTGTCCTGT 
AACGTATCTT CAACGGATGA TATTACCCTG CCGGGGATCA GCATTTATGC GGACGATAAA 
GCCATCCAAG ATGCCAGACA ATCCCCCAGC CCTGCAGCGC GTTCACGGAT GCTTAAACAG 
CGTGACATGG TTAAAGGGGG CGAGAAGAAA TGA
 
Protein sequence
MTTVNQIPDA NITPSLPPKI REAVDKVKVA KAVWQEERRK QTEAAAMIET IRKRQEDTKT 
ETQALNDEWR NLFRENQGNM TPRMKKLRAE IALGRETLDE FEDLLAAQAA ENEFLPWKTA 
DAANHYISEH NRLIETHAVW LWNEFMKEHG QKLIQILGLL KMTLGRSASA VIGVVHTVND 
PESVLKQFIS EQLTTPALSC NVSSTDDITL PGISIYADDK AIQDARQSPS PAARSRMLKQ 
RDMVKGGEKK