| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4830 |
|---|
| Symbol | |
|---|
| ID | 6485836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4704328 |
|---|
| End bp | 4705719 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642740043 |
|---|
| Product | gluconate:H+ symporter (hypothetical protein) family transporter |
|---|
| Protein accession | YP_002043721 |
|---|
| Protein GI | 194443242 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.742324 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGTCTG ACCAGGGAAA TACGACGCAG CGCGTAAGCG CTGCTATTTT GGCGCTAATA
AGAGAGACGA ATATGCCATT AATAATTATT GCGGCAGGCG TTGCGCTGCT GTTGGTCTTA
ATGATTGGCT TTAAAGTTAA CGGCTTTATC GCCCTTGTTC TGGTTGCCGC CGTGGTGGGA
TTTGCCGAAG GGATGGGCGC GCAAGACGTC CTGCACTCCA TACAAAACGG AATTGGCGGT
ACTCTGGGCG GACTCGCCAT GATCCTCGGT TTTGGCGCGA TGCTGGGAAG ATTAATTTCC
GATACCGGCG CCGCGCAGCG CATTGCGACG ACGCTCATTA ATACGTTCGG CAAAAAACGC
GTGCAATGGG CGCTGGTGAT CACCGGGCTT ATCGTCGGCC TGGCAATGTT TTTTGAAGTC
GGATTCGTAC TGCTGTTGCC GCTCGTTTTT ACGATTGTGG CCTCATCGGG ACTGCCCTTG
CTGTATGTCG GGGTTCCAAT GGTCGCCGCC TTATCCGTTA CGCACTGCTT CCTGCCGCCG
CATCCCGGCC CTACCGCTAT TGCGACAATT TTTGAGGCAA ATCTCGGTAC GACCCTGCTG
TATGGGTTAA TCATTACCAT ACCGACCGTG ATTGTTGCCG GCCCGCTGTT TTCAAAATTG
CTGGCGCGCT TTGAGAAAGC GCCGCCTGAA GGATTATTTA ATCCTCATCT ATTCAGTGAA
GAAGAGATGC CGTCATTCTG GAACAGTATT TTTGCCGCCG TGATCCCGGT CATTCTGATG
GCCATCGCAG CGGTATGTGA AATCACGCTG CCAAAAACGA ATGCCGTGCG GGTTTTCTTC
GAATTTATCG GTAATCCAGC AGTGGCGTTG TTTATTGCCA TTATCATCGC CATTTTTACG
CTGGGCCGAC GCAACGGACG TACGGTTGAG CAGGTGATGG ATATCGTCGG CGAGTCCATT
GGCGCTATTG CGATGATTGT TTTTATCATC GCGGGCGGCG GCGCGTTTAA ACAAGTGCTG
GTGGATAGCG GCGTGGGCCA ATATATCTCG CAATTAATGA CCGGCACCTC GCTATCTCCG
TTATTAATGT GCTGGACGGT AGCCGCCGTG CTGCGTATTG CGTTAGGTTC CGCGACCGTG
GCCGCGATAA CCACAGCGGG CGTCGTATTG CCGATTATTA ACGTAACCCA CGCCGATCCG
GCGTTAATGG TACTGGCGAC AGGCGCGGGA AGCGTTATTG CATCACATGT TAACGATCCC
GGTTTTTGGC TGTTTAAAGG GTATTTTAAT CTTAGCGTCG GGGAAACCCT ACGCACCTGG
ACCGTTATGG AAACATTGAT TTCTGTCATG GGGTTGCTGG GCGTACTGGC GCTGAATGCG
GTTCTGCATT AA
|
|---|
| Protein sequence | MPSDQGNTTQ RVSAAILALI RETNMPLIII AAGVALLLVL MIGFKVNGFI ALVLVAAVVG
FAEGMGAQDV LHSIQNGIGG TLGGLAMILG FGAMLGRLIS DTGAAQRIAT TLINTFGKKR
VQWALVITGL IVGLAMFFEV GFVLLLPLVF TIVASSGLPL LYVGVPMVAA LSVTHCFLPP
HPGPTAIATI FEANLGTTLL YGLIITIPTV IVAGPLFSKL LARFEKAPPE GLFNPHLFSE
EEMPSFWNSI FAAVIPVILM AIAAVCEITL PKTNAVRVFF EFIGNPAVAL FIAIIIAIFT
LGRRNGRTVE QVMDIVGESI GAIAMIVFII AGGGAFKQVL VDSGVGQYIS QLMTGTSLSP
LLMCWTVAAV LRIALGSATV AAITTAGVVL PIINVTHADP ALMVLATGAG SVIASHVNDP
GFWLFKGYFN LSVGETLRTW TVMETLISVM GLLGVLALNA VLH
|
|---|
| |