Gene SNSL254_A4816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4816 
Symbol 
ID6482497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4689758 
End bp4690210 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content54% 
IMG OID642740030 
Productputative cytoplasmic protein 
Protein accessionYP_002043708 
Protein GI194443005 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.686485 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones84 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG GCAATATTGA ACATCTGGAG GCCTGGCTGC CGACGGCGTT ACGGCAGGCG 
ATTGAGCACG TCAATGCGCA TGTCACGGCA ACGACCGCGC CAGGTAAGTA TGACATTGAC
GGTGACAGGC TGTTTTATAT GATTTCTGAA AATATGACGG AGCCGGGCGA ATCGCGCAGC
GCAGAGTATC ACGCCCGTTA TCTTGATATT CAGATTGTGC TACAAGGTCA GGAAGGGATG
GTATTCAGTA CCCGGCCTGC GGGAACGCCG CACACGGACT GGCTGGCGGA TAAAGACATT
GCATTTTTAC CGACGAGCGT CGACGAGAAA ACCGTCGTCC TGAACGAAGG CGACTTTGTG
GTGTTTTATC CCGGCGAAGT GCATAAGCCC CTGTGCGCGG TGGGAGAACC GGCGCGGGTA
CGTAAAGCGG TTGTGAAAAT GCTGATGGCG TAA
 
Protein sequence
MIIGNIEHLE AWLPTALRQA IEHVNAHVTA TTAPGKYDID GDRLFYMISE NMTEPGESRS 
AEYHARYLDI QIVLQGQEGM VFSTRPAGTP HTDWLADKDI AFLPTSVDEK TVVLNEGDFV
VFYPGEVHKP LCAVGEPARV RKAVVKMLMA