| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4800 |
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| Symbol | treC |
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| ID | 6483968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 4674183 |
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| End bp | 4675835 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642740014 |
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| Product | trehalose-6-phosphate hydrolase |
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| Protein accession | YP_002043692 |
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| Protein GI | 194443467 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02403] alpha,alpha-phosphotrehalase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.235757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 96 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTC CCCTCTGGTG GCAAAACGGC GTTATTTATC AGATCTACCC GAAAAGTTTT
CAGGACACGA CCGGCAGCGG CACTGGCGAT TTACGCGGCG TCACGCAGCG CCTTGACTAT
CTACAGCGAC TCGGCGTAGA TGCCATCTGG CTCACGCCGT TTTATATCTC GCCGCAGGTG
GATAACGGTT ATGACGTCGC AAATTATACG GCTATCGACC CGACCTACGG CACGCTGGAT
GATTTTGACG AGCTGGTCGC GCAGGCGAAA GCACGCGGTA TTCGTATCAT CCTAGATATG
GTGTTTAACC ATACTTCTAC CCAGCACGCC TGGTTTCGCG AAGCGCTGAA CAAAGAGAGT
CCATACCGTC AGTTTTATAT CTGGCGCGAT GGCACGCCGG ATGTCTGCCC GAATAACTGG
CAATCCAAAT TTGGCGGCAG CGCCTGGCGC TGGCATAGCC AGAGCGAACA ATATTATTTA
CACCTTTTCG CGCCTGAACA GGCCGACCTG AACTGGGAAA ACCCCGCCGT GCGCGCCGAG
CTGAAAAAGG TCTGCGAATT CTGGGCCGAT CGCGGCGTGG ATGGCCTGCG TCTGGACGTG
GTGAACCTGA TCGCCAAAGA TCAGAATTTT CCTGACGATC CGACGGGCGA CGGACGCCGC
TTTTATACCG ACGGGCCGCG CGCGCATACG TTTTTACGCG AAATGAACCG TGACGTTTTT
ACGCCGCGTA ATCTGATGAC GGTAGGCGAA ATGTCCTCTA CCACGCTGGA AAACTGCCAG
CAATATGCCG CGCTTAGCGG CGACGAACTC TCGATGACCT TCAATTTTCA TCATCTGAAG
GTGGATTACC CCAATGGCGA AAAGTGGACG CTGGCAAAAC CTGATTATGT GGCGCTGAAA
GCGTTGTTCC GCCACTGGCA ACAGGGGATG CATAACGTCG CCTGGAACGC GTTATTCTGG
TGTAATCACG ATCAGCCGCG CATCGTTTCC CGCTTTGGCG ACGAGGGTGA ATACCGGGTT
CCAGCCGCGA AAATGTTGGC GATGGCGCTG CACGGTATGC AAGGGACGCC TTATATCTAT
CAGGGAGAAG AAATCGGCAT GACCAACCCA CACTTTACCC GCATCACCGA TTATCGCGAC
GTGGAAAGTC ATAATATGTT TGCCGCGCTA CGCGCCGCCG GGCGCGACCC CGACGAACTG
CTGGCTATCC TGGCCAGTAA ATCCCGCGAC AACAGCCGCA CGCCGATGCA GTGGGACAAC
GGTAAAAACG CCGGTTTCAC CCAGGGCGAG CCGTGGATAA ACCTGTGCGA TAACTATGCG
GAGGTTAACG TCGCGGCAGC ATTACGCGAT GAAAACTCGG TGTTTTACAC CTATCAAAAG
CTGATTGCGC TACGTAAAAC CCAGCCTGTA CTGATCTGGG GCGATTATCA GGATCTCCTC
CCGGATAGCC CATCAGTATG GTGTTATCGC CGCCAGTGGC AGGGGCAAAT CCTGCTGGTT
GTCGCCAATC TGAGTAACCA GTGTCAGGAG TGGCATCCAC CGCATATCAA AGGACAGTGG
CAGGCGCTAC TGCACAATTA TGGCGAGGTC ACCAGCCAGC CAGCCGCGAT GACGCTCCGC
CCATTTGAAG CCATCTGGTG GTTACAACGC TAA
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| Protein sequence | MTIPLWWQNG VIYQIYPKSF QDTTGSGTGD LRGVTQRLDY LQRLGVDAIW LTPFYISPQV
DNGYDVANYT AIDPTYGTLD DFDELVAQAK ARGIRIILDM VFNHTSTQHA WFREALNKES
PYRQFYIWRD GTPDVCPNNW QSKFGGSAWR WHSQSEQYYL HLFAPEQADL NWENPAVRAE
LKKVCEFWAD RGVDGLRLDV VNLIAKDQNF PDDPTGDGRR FYTDGPRAHT FLREMNRDVF
TPRNLMTVGE MSSTTLENCQ QYAALSGDEL SMTFNFHHLK VDYPNGEKWT LAKPDYVALK
ALFRHWQQGM HNVAWNALFW CNHDQPRIVS RFGDEGEYRV PAAKMLAMAL HGMQGTPYIY
QGEEIGMTNP HFTRITDYRD VESHNMFAAL RAAGRDPDEL LAILASKSRD NSRTPMQWDN
GKNAGFTQGE PWINLCDNYA EVNVAAALRD ENSVFYTYQK LIALRKTQPV LIWGDYQDLL
PDSPSVWCYR RQWQGQILLV VANLSNQCQE WHPPHIKGQW QALLHNYGEV TSQPAAMTLR
PFEAIWWLQR
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