Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4775 |
Symbol | |
ID | 6482553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4649788 |
End bp | 4653567 |
Gene Length | 3780 bp |
Protein Length | 1259 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739989 |
Product | hypothetical protein |
Protein accession | YP_002043667 |
Protein GI | 194443970 |
COG category | [S] Function unknown |
COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTAT GGAAGAAAAT AAGCCTCGGC GTGTTGATTT TCATTGTGGT GTTACTGGCG AGCGTTGCGT TTCTGGTCGG GACGACGACG GGGCTGCATC TGGTATTCAG TGCGGCGAAC CGCTGGGTGC CGGGGCTGGA GATTGGGCAG GTCACCGGCG GCTGGCGGGA CTTATCGTTA AAAAATATCC GCTATGAGCA GCCGGGCGTT GCGGTAAATG CGGGCGAAAT TCATCTGGCC GTCGGGCTTG ATTGCCTGTG GCGCAGTAGC CTGTGCGTCA ATGATCTGGC GCTAAAAGAC ATTAATGTCG CTATCGACAG CAAAAAAATG CCGCCTTCCG AACCGGCGCA AGAAGAGGAA GAAAGCGGAC CGCTGAACCT CTCCACGCCC TGGCCCATCA CGCTGTCGCG CGTGGCGTTG AATAACATCA ATATCAAGAT TGATGACACT ACCGTTTCGG TGCTGGATTT TACCTCCGGG CTGGCATGGC AGGAGAAAAA CCTGACCCTG AAACCGACGC GGCTTCAGGG ATTGCTGATC GCGCTGCCGA AGGTCGCTGA CGTGGCGCAG GAAGAGGTGG TTGAACCCAA AATCGAGAAA CCTCAACCGG ATGAAAAGCC GCTTGGCGAA ACGCTAAAAG ATCTGTTTGC AAAACCAGTA ATGCCGGAGA TGACCGATGT TCACCTGCCG CTCAATCTGA ATATCGAGTC ATTTCGCGGC GAGCAGCTAC GCATCACCGG CGATACCGAT CTGACGGTGC GCACGATGCT GCTTAAAGTC AGCAGTATCG ACGGTAATAT GAAGCTGGAT ACTCTGGATA TCGACGCCAA CCAGGGCACG GTGAAAGCCT CCGGTACGGC GCAGCTCGCC AATAACTGGC CGGTTGATAT TACGCTCAAC AGTACGCTGA ATATCGATCC GCTAAAGGGT GAAAAGATAA AACTCAAGGT CGGCGGCGCG TTACGCGAAC AACTGGAGGT CGGGGTGAAC CTTTCCGGGC CGATGGATGT CGCGCTTCGC GCCCAGACGC GGCTGGCGGA GGCCGGTTTA CCGCTCAATC TTGAAGTCGT CAGCCAACGC ATTGCCTGGC CATTGACGGG TGATACCCAG TTTCAGGCTG ACGATCTGAA GCTCAAACTG AGCGGTAAGA TGACCGACTA TACGTTGTCG ATGCGAACCA CCGTGAAAGG ACAAGATATT CCGCCGGCGA CCATCACGCT GGATGCCAAA GGGAATGAGC GGCAGATTAA TCTCGATAAA CTTACCATCG CCGCTCTGGA GGGAAAAACC GAACTGAAAG CGCTGGTGGA CTGGCAGCAG GCGATTAGCT GGCGTGGCGA ACTGACGCTG AATGGCATCA ATACCGCTAA AGAGATCCCG GACTGGCCCG CGAAGCTTAA CGGCGTCATG AAAACCAAAG GCAGCCTCTA CGGCGGCACC TGGCAGATGG ATGTTCCGGA GCTCAAGCTG ACCGGCAATG TGAAGCAGAA CAGCGTTAAC GTCAACGGGA CGCTAAAGGG CAACAGCTAC ATGCAGTGGA CGATCCCGGG GCTGCACCTT GCGCTGGGCC CAAACAGCGC CGATATAAAA GGCGAGCTTG GTGTTAAGGA GCTGAATCTT GACGCCGCCA TCGATGCGCC AGGGCTGGAT AATGCGCTGC CAGGGCTGGG GGGCATGGCA AAAGGAATTG TTAAAGTCCG CGGTACGGTA GAAGCGCCGC AGCTGTTGGC GGATATCACC GCCCGCGGCT TGCGCTGGCA GGAGCTTTCT GTCGCCCAGG CGCGCATCGA GGGCGATATT AAATCCACCG ATCAGATAGC GGGCCATCTC AACGTTCGCG TAGAGCGGAT TTCGCAGCCC GACGTTAACA TCAATCTGGT GACGCTTGAC GCCAAAGGCA GCGAGAAGCA GCATCAGCTA CAGCTCCGTG TTCAGGGAGA ACCGGTATCC GGTCAACTCT CCCTGACAGG CAGTTTTGAT CGCGAGGCGG CGCGCTGGAA AGGGACGTTA AGCGACACCC GTTTCCAGAC GCCAGTGGGG CCATGGTCGT TGACCCGCGC GATTGCGCTG GACTACCGTA ATAAAGAACA GAAAATTAGT ATCGGGCCGC ATTGTTGGCT GAACCCGAAC GCCGAGCTGT GCATCCCGCA AACCATTGAT GCGGGCGCCG CAGGACGGGC GGTGGTCAAT CTCAACCGCT TTGATCTGGC GATGCTGAAG CCATTTATGC CTGATACCAC TCAGGCCAGC GGGATCTTTA GCGGGAAAGC GGACGTGTCG TGGGACACCA CCCAGGAGGG ATTGCCGCAG GGGAAGGTCA CGCTTTCCGG TCGTAATGTG AAGGTCACGC AGACCGTCAA TGACGCGCCA TTACCGGTCG CGTTTGAGAC GCTGAACCTC AGCGCCGATC TGCACAATAA TCGCGCCGAG CTGGGATGGC TGATTCGCCT GACGAACAAT GGTCAATTCG ATGGCCAGGT GCAGGTAACC GATCCTCAGG GGCGGCGCAA TCTCGGCGGT AACGTCAACA TGCGCAATCT CAATCTGGCG ATGGTCAACC CTGTCTTTTC GCGCGGCGAA AAAGCGGCGG GAATGTTAAA CGCCAGGCTA CGTCTGGGCG GCGATGTACA AAGCCCGCAG TTGTTTGGTC AGTTGCAGCT TAGCGCGCTG GATATTGACG GTAATTTTAT GCCGTTTGAG ATGCAGCCGA GCCAGCTCAC CATGAACTTT AGCGGGACGC GTTCGACGCT CGCCGGTATC GTGCGAACAC AACAAGGGCA AATTAACCTG AACGGCAACG CCGACTGGAG TCAGATTGAC AACTGGCGCG CGCGGGTGAC GGCGAAAGGC AGCCGGGTGC GGATTACCGT TCCGCCGATG GTGCGCCTGG ATGTCTCGCC GGATGTGGTC TTTGACGCGA CGCCTTCGCT GTTCACGTTG GATGGGCGTG TGGACGTTCC GTGGGCGCGA ATTGTGGTGC ACGACCTGCC AGAGAGTGCG GTTGGCGTCT CCAGCGATGT GGTTATGCTC AACAATGACC TGCAACCAGA AACGCCGCAG ACAGCGTCTA TTCCCATCAA CAGTAATCTG ACGGTCCACG TCGGCAACAA CGTGCGTATC GACGCCTTCG GGCTTAAAGC GCGTTTGACC GGCGATTTGA AAGTCGCGCA GGATAAGCAG GGGCTGGGGT TGAATGGTCA AATCAATATT CCTGACGGCC GATTCCGCGC CTACGGCCAG GACCTGCTTG TCCGTAAAGG CGAGCTGCTG TTCTCCGGCC CGCCGGATCA GCCGCTGCTC AATATCGAAG CGATCCGTAA CCCTGACGCC ACCGAAGACG ATGTCATTGC GGGCGTGCGC GTCACAGGCA CTGCTGATGA ACCCAAAGCG GAAATCTTCT CCGATCCGGC GATGCCGCAG GCTGAAGCGC TTTCTTATCT GCTGCGTGGG CAGGGGTTGG ACAGCAATCA GAGTGATAGC GCAGCAATGA CCTCCATGCT TATTGGTCTG GGGGTTGCGC AAAGTGGTCA GGTTGTGGGT AAAATCGGAG AGACATTCGG TGTAAGTAAT CTGGCGCTGG ACACGCAAGG GGTGGGCGAT TCGTCCCAGG TTGTGGTCAG CGGCTATGTA CTGCCGGGTC TACAGGTGAA GTATGGTGTA GGGATATTTG ACTCTCTGGC GACGCTCACG TTACGTTATC GCCTGATGCC TAAGCTATAT CTGGAAGCAG TGTCTGGCGT AGATCAGGCA CTTGATTTGC TCTATCAGTT TGAGTTTTAG
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Protein sequence | MSLWKKISLG VLIFIVVLLA SVAFLVGTTT GLHLVFSAAN RWVPGLEIGQ VTGGWRDLSL KNIRYEQPGV AVNAGEIHLA VGLDCLWRSS LCVNDLALKD INVAIDSKKM PPSEPAQEEE ESGPLNLSTP WPITLSRVAL NNINIKIDDT TVSVLDFTSG LAWQEKNLTL KPTRLQGLLI ALPKVADVAQ EEVVEPKIEK PQPDEKPLGE TLKDLFAKPV MPEMTDVHLP LNLNIESFRG EQLRITGDTD LTVRTMLLKV SSIDGNMKLD TLDIDANQGT VKASGTAQLA NNWPVDITLN STLNIDPLKG EKIKLKVGGA LREQLEVGVN LSGPMDVALR AQTRLAEAGL PLNLEVVSQR IAWPLTGDTQ FQADDLKLKL SGKMTDYTLS MRTTVKGQDI PPATITLDAK GNERQINLDK LTIAALEGKT ELKALVDWQQ AISWRGELTL NGINTAKEIP DWPAKLNGVM KTKGSLYGGT WQMDVPELKL TGNVKQNSVN VNGTLKGNSY MQWTIPGLHL ALGPNSADIK GELGVKELNL DAAIDAPGLD NALPGLGGMA KGIVKVRGTV EAPQLLADIT ARGLRWQELS VAQARIEGDI KSTDQIAGHL NVRVERISQP DVNINLVTLD AKGSEKQHQL QLRVQGEPVS GQLSLTGSFD REAARWKGTL SDTRFQTPVG PWSLTRAIAL DYRNKEQKIS IGPHCWLNPN AELCIPQTID AGAAGRAVVN LNRFDLAMLK PFMPDTTQAS GIFSGKADVS WDTTQEGLPQ GKVTLSGRNV KVTQTVNDAP LPVAFETLNL SADLHNNRAE LGWLIRLTNN GQFDGQVQVT DPQGRRNLGG NVNMRNLNLA MVNPVFSRGE KAAGMLNARL RLGGDVQSPQ LFGQLQLSAL DIDGNFMPFE MQPSQLTMNF SGTRSTLAGI VRTQQGQINL NGNADWSQID NWRARVTAKG SRVRITVPPM VRLDVSPDVV FDATPSLFTL DGRVDVPWAR IVVHDLPESA VGVSSDVVML NNDLQPETPQ TASIPINSNL TVHVGNNVRI DAFGLKARLT GDLKVAQDKQ GLGLNGQINI PDGRFRAYGQ DLLVRKGELL FSGPPDQPLL NIEAIRNPDA TEDDVIAGVR VTGTADEPKA EIFSDPAMPQ AEALSYLLRG QGLDSNQSDS AAMTSMLIGL GVAQSGQVVG KIGETFGVSN LALDTQGVGD SSQVVVSGYV LPGLQVKYGV GIFDSLATLT LRYRLMPKLY LEAVSGVDQA LDLLYQFEF
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