Gene SNSL254_A4775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4775 
Symbol 
ID6482553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4649788 
End bp4653567 
Gene Length3780 bp 
Protein Length1259 aa 
Translation table11 
GC content57% 
IMG OID642739989 
Producthypothetical protein 
Protein accessionYP_002043667 
Protein GI194443970 
COG category[S] Function unknown 
COG ID[COG2911] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones95 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT GGAAGAAAAT AAGCCTCGGC GTGTTGATTT TCATTGTGGT GTTACTGGCG 
AGCGTTGCGT TTCTGGTCGG GACGACGACG GGGCTGCATC TGGTATTCAG TGCGGCGAAC
CGCTGGGTGC CGGGGCTGGA GATTGGGCAG GTCACCGGCG GCTGGCGGGA CTTATCGTTA
AAAAATATCC GCTATGAGCA GCCGGGCGTT GCGGTAAATG CGGGCGAAAT TCATCTGGCC
GTCGGGCTTG ATTGCCTGTG GCGCAGTAGC CTGTGCGTCA ATGATCTGGC GCTAAAAGAC
ATTAATGTCG CTATCGACAG CAAAAAAATG CCGCCTTCCG AACCGGCGCA AGAAGAGGAA
GAAAGCGGAC CGCTGAACCT CTCCACGCCC TGGCCCATCA CGCTGTCGCG CGTGGCGTTG
AATAACATCA ATATCAAGAT TGATGACACT ACCGTTTCGG TGCTGGATTT TACCTCCGGG
CTGGCATGGC AGGAGAAAAA CCTGACCCTG AAACCGACGC GGCTTCAGGG ATTGCTGATC
GCGCTGCCGA AGGTCGCTGA CGTGGCGCAG GAAGAGGTGG TTGAACCCAA AATCGAGAAA
CCTCAACCGG ATGAAAAGCC GCTTGGCGAA ACGCTAAAAG ATCTGTTTGC AAAACCAGTA
ATGCCGGAGA TGACCGATGT TCACCTGCCG CTCAATCTGA ATATCGAGTC ATTTCGCGGC
GAGCAGCTAC GCATCACCGG CGATACCGAT CTGACGGTGC GCACGATGCT GCTTAAAGTC
AGCAGTATCG ACGGTAATAT GAAGCTGGAT ACTCTGGATA TCGACGCCAA CCAGGGCACG
GTGAAAGCCT CCGGTACGGC GCAGCTCGCC AATAACTGGC CGGTTGATAT TACGCTCAAC
AGTACGCTGA ATATCGATCC GCTAAAGGGT GAAAAGATAA AACTCAAGGT CGGCGGCGCG
TTACGCGAAC AACTGGAGGT CGGGGTGAAC CTTTCCGGGC CGATGGATGT CGCGCTTCGC
GCCCAGACGC GGCTGGCGGA GGCCGGTTTA CCGCTCAATC TTGAAGTCGT CAGCCAACGC
ATTGCCTGGC CATTGACGGG TGATACCCAG TTTCAGGCTG ACGATCTGAA GCTCAAACTG
AGCGGTAAGA TGACCGACTA TACGTTGTCG ATGCGAACCA CCGTGAAAGG ACAAGATATT
CCGCCGGCGA CCATCACGCT GGATGCCAAA GGGAATGAGC GGCAGATTAA TCTCGATAAA
CTTACCATCG CCGCTCTGGA GGGAAAAACC GAACTGAAAG CGCTGGTGGA CTGGCAGCAG
GCGATTAGCT GGCGTGGCGA ACTGACGCTG AATGGCATCA ATACCGCTAA AGAGATCCCG
GACTGGCCCG CGAAGCTTAA CGGCGTCATG AAAACCAAAG GCAGCCTCTA CGGCGGCACC
TGGCAGATGG ATGTTCCGGA GCTCAAGCTG ACCGGCAATG TGAAGCAGAA CAGCGTTAAC
GTCAACGGGA CGCTAAAGGG CAACAGCTAC ATGCAGTGGA CGATCCCGGG GCTGCACCTT
GCGCTGGGCC CAAACAGCGC CGATATAAAA GGCGAGCTTG GTGTTAAGGA GCTGAATCTT
GACGCCGCCA TCGATGCGCC AGGGCTGGAT AATGCGCTGC CAGGGCTGGG GGGCATGGCA
AAAGGAATTG TTAAAGTCCG CGGTACGGTA GAAGCGCCGC AGCTGTTGGC GGATATCACC
GCCCGCGGCT TGCGCTGGCA GGAGCTTTCT GTCGCCCAGG CGCGCATCGA GGGCGATATT
AAATCCACCG ATCAGATAGC GGGCCATCTC AACGTTCGCG TAGAGCGGAT TTCGCAGCCC
GACGTTAACA TCAATCTGGT GACGCTTGAC GCCAAAGGCA GCGAGAAGCA GCATCAGCTA
CAGCTCCGTG TTCAGGGAGA ACCGGTATCC GGTCAACTCT CCCTGACAGG CAGTTTTGAT
CGCGAGGCGG CGCGCTGGAA AGGGACGTTA AGCGACACCC GTTTCCAGAC GCCAGTGGGG
CCATGGTCGT TGACCCGCGC GATTGCGCTG GACTACCGTA ATAAAGAACA GAAAATTAGT
ATCGGGCCGC ATTGTTGGCT GAACCCGAAC GCCGAGCTGT GCATCCCGCA AACCATTGAT
GCGGGCGCCG CAGGACGGGC GGTGGTCAAT CTCAACCGCT TTGATCTGGC GATGCTGAAG
CCATTTATGC CTGATACCAC TCAGGCCAGC GGGATCTTTA GCGGGAAAGC GGACGTGTCG
TGGGACACCA CCCAGGAGGG ATTGCCGCAG GGGAAGGTCA CGCTTTCCGG TCGTAATGTG
AAGGTCACGC AGACCGTCAA TGACGCGCCA TTACCGGTCG CGTTTGAGAC GCTGAACCTC
AGCGCCGATC TGCACAATAA TCGCGCCGAG CTGGGATGGC TGATTCGCCT GACGAACAAT
GGTCAATTCG ATGGCCAGGT GCAGGTAACC GATCCTCAGG GGCGGCGCAA TCTCGGCGGT
AACGTCAACA TGCGCAATCT CAATCTGGCG ATGGTCAACC CTGTCTTTTC GCGCGGCGAA
AAAGCGGCGG GAATGTTAAA CGCCAGGCTA CGTCTGGGCG GCGATGTACA AAGCCCGCAG
TTGTTTGGTC AGTTGCAGCT TAGCGCGCTG GATATTGACG GTAATTTTAT GCCGTTTGAG
ATGCAGCCGA GCCAGCTCAC CATGAACTTT AGCGGGACGC GTTCGACGCT CGCCGGTATC
GTGCGAACAC AACAAGGGCA AATTAACCTG AACGGCAACG CCGACTGGAG TCAGATTGAC
AACTGGCGCG CGCGGGTGAC GGCGAAAGGC AGCCGGGTGC GGATTACCGT TCCGCCGATG
GTGCGCCTGG ATGTCTCGCC GGATGTGGTC TTTGACGCGA CGCCTTCGCT GTTCACGTTG
GATGGGCGTG TGGACGTTCC GTGGGCGCGA ATTGTGGTGC ACGACCTGCC AGAGAGTGCG
GTTGGCGTCT CCAGCGATGT GGTTATGCTC AACAATGACC TGCAACCAGA AACGCCGCAG
ACAGCGTCTA TTCCCATCAA CAGTAATCTG ACGGTCCACG TCGGCAACAA CGTGCGTATC
GACGCCTTCG GGCTTAAAGC GCGTTTGACC GGCGATTTGA AAGTCGCGCA GGATAAGCAG
GGGCTGGGGT TGAATGGTCA AATCAATATT CCTGACGGCC GATTCCGCGC CTACGGCCAG
GACCTGCTTG TCCGTAAAGG CGAGCTGCTG TTCTCCGGCC CGCCGGATCA GCCGCTGCTC
AATATCGAAG CGATCCGTAA CCCTGACGCC ACCGAAGACG ATGTCATTGC GGGCGTGCGC
GTCACAGGCA CTGCTGATGA ACCCAAAGCG GAAATCTTCT CCGATCCGGC GATGCCGCAG
GCTGAAGCGC TTTCTTATCT GCTGCGTGGG CAGGGGTTGG ACAGCAATCA GAGTGATAGC
GCAGCAATGA CCTCCATGCT TATTGGTCTG GGGGTTGCGC AAAGTGGTCA GGTTGTGGGT
AAAATCGGAG AGACATTCGG TGTAAGTAAT CTGGCGCTGG ACACGCAAGG GGTGGGCGAT
TCGTCCCAGG TTGTGGTCAG CGGCTATGTA CTGCCGGGTC TACAGGTGAA GTATGGTGTA
GGGATATTTG ACTCTCTGGC GACGCTCACG TTACGTTATC GCCTGATGCC TAAGCTATAT
CTGGAAGCAG TGTCTGGCGT AGATCAGGCA CTTGATTTGC TCTATCAGTT TGAGTTTTAG
 
Protein sequence
MSLWKKISLG VLIFIVVLLA SVAFLVGTTT GLHLVFSAAN RWVPGLEIGQ VTGGWRDLSL 
KNIRYEQPGV AVNAGEIHLA VGLDCLWRSS LCVNDLALKD INVAIDSKKM PPSEPAQEEE
ESGPLNLSTP WPITLSRVAL NNINIKIDDT TVSVLDFTSG LAWQEKNLTL KPTRLQGLLI
ALPKVADVAQ EEVVEPKIEK PQPDEKPLGE TLKDLFAKPV MPEMTDVHLP LNLNIESFRG
EQLRITGDTD LTVRTMLLKV SSIDGNMKLD TLDIDANQGT VKASGTAQLA NNWPVDITLN
STLNIDPLKG EKIKLKVGGA LREQLEVGVN LSGPMDVALR AQTRLAEAGL PLNLEVVSQR
IAWPLTGDTQ FQADDLKLKL SGKMTDYTLS MRTTVKGQDI PPATITLDAK GNERQINLDK
LTIAALEGKT ELKALVDWQQ AISWRGELTL NGINTAKEIP DWPAKLNGVM KTKGSLYGGT
WQMDVPELKL TGNVKQNSVN VNGTLKGNSY MQWTIPGLHL ALGPNSADIK GELGVKELNL
DAAIDAPGLD NALPGLGGMA KGIVKVRGTV EAPQLLADIT ARGLRWQELS VAQARIEGDI
KSTDQIAGHL NVRVERISQP DVNINLVTLD AKGSEKQHQL QLRVQGEPVS GQLSLTGSFD
REAARWKGTL SDTRFQTPVG PWSLTRAIAL DYRNKEQKIS IGPHCWLNPN AELCIPQTID
AGAAGRAVVN LNRFDLAMLK PFMPDTTQAS GIFSGKADVS WDTTQEGLPQ GKVTLSGRNV
KVTQTVNDAP LPVAFETLNL SADLHNNRAE LGWLIRLTNN GQFDGQVQVT DPQGRRNLGG
NVNMRNLNLA MVNPVFSRGE KAAGMLNARL RLGGDVQSPQ LFGQLQLSAL DIDGNFMPFE
MQPSQLTMNF SGTRSTLAGI VRTQQGQINL NGNADWSQID NWRARVTAKG SRVRITVPPM
VRLDVSPDVV FDATPSLFTL DGRVDVPWAR IVVHDLPESA VGVSSDVVML NNDLQPETPQ
TASIPINSNL TVHVGNNVRI DAFGLKARLT GDLKVAQDKQ GLGLNGQINI PDGRFRAYGQ
DLLVRKGELL FSGPPDQPLL NIEAIRNPDA TEDDVIAGVR VTGTADEPKA EIFSDPAMPQ
AEALSYLLRG QGLDSNQSDS AAMTSMLIGL GVAQSGQVVG KIGETFGVSN LALDTQGVGD
SSQVVVSGYV LPGLQVKYGV GIFDSLATLT LRYRLMPKLY LEAVSGVDQA LDLLYQFEF