Gene SNSL254_A4742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4742 
Symbol 
ID6484156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4622123 
End bp4622878 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content54% 
IMG OID642739957 
Producttranscriptional repressor UlaR 
Protein accessionYP_002043635 
Protein GI194443164 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG CACAAAGACA TCAAATACTG CTGGATATGC TGGCACAGTT GGGCTTTGTT 
ACCGTCGAAA ACGTGATTGA GCGTCTGGGG ATCTCCCCGG CGACAGCGCG CCGCGACATC
AACAAGCTCG ACGAAAGCGG GAAACTTAAA AAAGTGCGCA ACGGCGCAGA GGCCATTACC
CAACAGCGGC CCCGCTGGAC GCCGATGAAT CTGCACCAGG CGCAAAACCA CGATGAAAAA
GTACGCATCG CGAAAGCGGC GTCGCAGCTG GTAAACCCGG GTGAAAGCGT AGTGATTAAC
TGCGGCTCCA CCGCTTTCCT GCTGGGGCGT GAAATGTGCG GGAAACCGGT ACAGATCATT
ACCAACTATC TGCCGCTGGC GAATTATCTG ATCGATCAAG AGCATGACAG CGTGATTATC
ATGGGTGGTC AGTATAATAA AAGCCAGTCG ATTACCCTGA GCCCGCAGGG AAGTGAAAAC
AGTCTCTATG CTGGCCACTG GATGTTTACC AGCGGAAAGG GCTTAACCGC GGATGGCCTG
TACAAGACCG ATATGCTAAC CGCCATGGCG GAACAAAAAA TGCTCAGCGT CGTCGGGAAA
CTGGTCGCGC TGGTCGATAG CAGTAAAATT GGCGAGCGCG CGGGAATGCT GTTCAGCCGC
GCCGATCAGA TCGCTATGCT GATTACCGGC AAAAATGCCA ATCCGCAGGT TTTGCAACAG
CTTGAAGCCC AGGGTGTAAG CATACTCCGC GTTTAA
 
Protein sequence
MTEAQRHQIL LDMLAQLGFV TVENVIERLG ISPATARRDI NKLDESGKLK KVRNGAEAIT 
QQRPRWTPMN LHQAQNHDEK VRIAKAASQL VNPGESVVIN CGSTAFLLGR EMCGKPVQII
TNYLPLANYL IDQEHDSVII MGGQYNKSQS ITLSPQGSEN SLYAGHWMFT SGKGLTADGL
YKTDMLTAMA EQKMLSVVGK LVALVDSSKI GERAGMLFSR ADQIAMLITG KNANPQVLQQ
LEAQGVSILR V