Gene SNSL254_A4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4724 
SymbolhflK 
ID6485806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4605627 
End bp4606886 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content56% 
IMG OID642739940 
ProductFtsH protease regulator HflK 
Protein accessionYP_002043618 
Protein GI194442767 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID[TIGR01933] HflK protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones90 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGA ATCAGCCCGG TAATAACGGA CAGGACCGCG ACCCGTGGGG AAGCAGCAAA 
CCTGGCAGCA ACTCTGGGGG AAATGGAAAC AAAGGTGGCC GCGATCAGGG ACCTCCCGAT
CTGGATGATA TCTTCCGTAA GCTGAGTAAA AAACTCGGTG GTTTTGGGGG CGGTAAAGGC
ACCGGTTCCG GCGGCGGTAG CTCATCGCAA GGTCCGCGTC CGCAACTGGG AGGCCGTATT
GTCGCCATCG CCGCGGCGGC AGTAGTCATT ATCTGGGCGG CCAGCGGTTT TTATACCATT
AAAGAAGCCG AGCGCGGCGT TGTGACGCGT TTTGGTAAAT TCAGCCATCT GGTAGAGCCA
GGTCTGAACT GGAAGCCGAC ATTTATTGAC GACGTCACGC CGGTGAACGT CGAAGCGGTG
CGCGAACTGG CGGCGTCAGG CGTGATGCTG ACGTCTGATG AAAACGTCGT GCGCGTTGAA
ATGAACGTGC AATACCGCGT CACCGATCCG CAGAAATATC TGTTTAGCGT GACCAGCCCG
GACGATAGCC TGCGTCAGGC CACCGACAGC GCGCTGCGTG GCGTCATTGG TAAATACACG
ATGGATCGCA TCCTGACCGA AGGTCGTACC GTTATTCGTA GCGATACCCA ACGCGAGCTG
GAAGAGACTA TCAAACCGTA CAACATGGGG ATTACCCTGC TGGACGTGAA CTTCCAGGCT
GCGCGTCCGC CGGAAGAGGT GAAAGCCGCC TTTGACGACG CGATTGCCGC ACGTGAAAAC
GAGCAGCAGT ACATTCGTGA AGCGGAAGCG TATACCAACG AAGTTCAGCC GCGCGCCAAC
GGTCAGGCGC AGCGTATTCT GGAAGAGGCA CGCGCCTATA AAACCCAGAC TATCCTGGAA
GCGCAGGGTG AAGTCGCCCG GTTTGCGAAG ATTTTGCCGG AATATAAAGC TGCGCCTCAG
ATTACACGCG AGCGTCTGTA TATTGAAACG ATGGAAAAAG TGCTGAGCCA TACCCGTAAA
GTACTGGTTA ACGACAAGAG CGGTAATTTA ATGGTGCTGC CGTTAGATCA GATGCTGAAA
GGCGGGAATG CGCCGGCGGC AAAGAGCGAC AATAGCGCCA GCAACCTGCT GCGCCTGCCG
CCGTCCACAA AATCTAACGC CAGCGGAGCA AGTAACACGT CGTCCTCAAA TCAGGGCGAT
ATTATGGACC AACGCCGCGC GAATGCGCAG CGTAACGACT ACCAGCGTCA GGGGGAATAA
 
Protein sequence
MAWNQPGNNG QDRDPWGSSK PGSNSGGNGN KGGRDQGPPD LDDIFRKLSK KLGGFGGGKG 
TGSGGGSSSQ GPRPQLGGRI VAIAAAAVVI IWAASGFYTI KEAERGVVTR FGKFSHLVEP
GLNWKPTFID DVTPVNVEAV RELAASGVML TSDENVVRVE MNVQYRVTDP QKYLFSVTSP
DDSLRQATDS ALRGVIGKYT MDRILTEGRT VIRSDTQREL EETIKPYNMG ITLLDVNFQA
ARPPEEVKAA FDDAIAAREN EQQYIREAEA YTNEVQPRAN GQAQRILEEA RAYKTQTILE
AQGEVARFAK ILPEYKAAPQ ITRERLYIET MEKVLSHTRK VLVNDKSGNL MVLPLDQMLK
GGNAPAAKSD NSASNLLRLP PSTKSNASGA SNTSSSNQGD IMDQRRANAQ RNDYQRQGE