Gene SNSL254_A4700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4700 
Symbol 
ID6483508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4581250 
End bp4581783 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID642739916 
Productouter membrane lipoprotein Blc 
Protein accessionYP_002043597 
Protein GI194444045 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGC TGCCCGTCGT TGCTGCGGTT ACTGCGGCAT TTTTGGTTGT CGCCTGTAGT 
TCGCCTACCC CGCCTAAAGG CGTTACCGTG GTAAATAACT TTGATGCCAA ACGTTACCTC
GGCACCTGGT ATGAGATCGC ACGCCTCGAT CATCGATTTG AACGTGGACT GGAACAAGTC
ACGGCCACCT ATAGTCTGCG TGACGATGGC GGGATTAATG TCATCAATAA AGGCTATAAC
CCGGATCGGG AAATGTGGCA AAAAACAGAA GGCAAAGCGT ATTTTACCGG TAGTCCAAAC
CGCGCCGCGC TCAAGGTCTC TTTTTTCGGC CCGTTCTACG GCGGCTATAA CGTGATTGCG
CTTGACCGGG AATACCGTCA TGCGCTGGTG TGCGGCCCGG ATCGCGACTA TCTGTGGATA
CTCTCTCGCA CGCCAACGCT TTCTGAGGAA ATAAAACAGC AAATGCTGGC CGTCGCGACC
CGGGAGGGGT TTGACGTCAA TAAATTAATT TGGGTAAAAC AATCAGGTTC GTAG
 
Protein sequence
MRLLPVVAAV TAAFLVVACS SPTPPKGVTV VNNFDAKRYL GTWYEIARLD HRFERGLEQV 
TATYSLRDDG GINVINKGYN PDREMWQKTE GKAYFTGSPN RAALKVSFFG PFYGGYNVIA
LDREYRHALV CGPDRDYLWI LSRTPTLSEE IKQQMLAVAT REGFDVNKLI WVKQSGS