Gene SNSL254_A4686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4686 
SymboldcuA 
ID6482551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4568938 
End bp4570239 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content54% 
IMG OID642739904 
Productanaerobic C4-dicarboxylate transporter 
Protein accessionYP_002043585 
Protein GI194446383 
COG category[R] General function prediction only 
COG ID[COG2704] Anaerobic C4-dicarboxylate transporter 
TIGRFAM ID[TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTTG TCGAACTTAT CATTGTTTTG CTGGCAATCT TTTTGGGCGC CAGACTTGGG 
GGCATCGGTA TTGGATTCGC AGGTGGGCTG GGTGTTCTGG TACTTGCCGC CATCGGCGTG
AAGCCAGGGA CAATTCCATT CGATGTCATT TCCATCATCA TGGCGGTTAT CGCCGCGATC
TCTGCTATGC AGGTCGCGGG CGGTCTGGAT TATTTGGTAA ACCAGACGGA AAAACTGCTG
CGTAAGAACC CGAAATACAT CACTATCCTC GCACCGATTG TGACCTATTT CCTGACTATT
TTTGCTGGTA CCGGGAACAT TTCCCTGGCA ACGCTGCCGG TTATTGCTGA AGTCGCGAAG
GAGCAGGGAA TCAAACCTTG CCGTCCGCTC TCGACCGCCG TGGTATCCGC GCAGATTGCG
ATTACCGCCT CGCCGATTTC TGCGGCCGTG GTGTATATGT CTTCTGTTAT GGAAGGTCAT
GGCATTAGCT ACATTCACCT GCTGTCCGTG GTTATCCCCT CTACGCTGCT GGCGGTGCTG
GTGATGTCCT TCCTGGTCAC GATGCTGTTC AACTCCAAAC TGTCGGACGA CCCGATTTAC
CGCAAGCGTC TGGAAGAAGG GCTGATTGAA CTGCGTGGTG AAAAGCAGAT TGAAATCAAA
CCGATGGCAA AAAATTCCGT CTGGCTGTTC CTGCTGGGCG TTATTTGCGT GGTTGTTTAT
GCGATTGTCA ACAGTCCGAG CCTCGGCCTG GTTGAGAAAC CGCTGATGAA CACCACCAAC
GCTATTTTGA TCATCATGTT GAGCGTCGCA ACGCTGACCA CCATCCTGTG TAAAGTGGAA
ACTGACGCCA TCCTCAACTC CAGTACCTTT AAAGCAGGGA TGAGCGCCTG TATCTGTATT
CTGGGCGTGG CGTGGCTGGG CGATACTTTC GTATCCGCTA ACATCGACTG GATCAAAGAC
ACTGCGGGTA GCGTCATCCA GGGTCATCCG TGGCTGCTGG CCGTCATCTT CTTCTTTGCT
TCCGCGCTGC TCTACTCTCA GGCGGCAACG GCGAAAGCGC TGATGCCGAT GGCGCTGGCG
CTGAACGTCT CTCCGCTGAC GGCAGTCGCT TCCTTCGCCG CCGTTTCCGG CCTGTTCATT
TTGCCGACCT ACCCGACTCT GGTTGCGGCG GTACAGATGG ATGACACCGG TACAACCCGT
ATCGGTAAAT TCGTCTTTAA CCACCCGTTC TTCATCCCAG GCACCCTGGG CGTCGTTCTG
GCTGTCTGCT TCGGCTTCCT GCTGGGCAGC TTTATGCTGT AA
 
Protein sequence
MIVVELIIVL LAIFLGARLG GIGIGFAGGL GVLVLAAIGV KPGTIPFDVI SIIMAVIAAI 
SAMQVAGGLD YLVNQTEKLL RKNPKYITIL APIVTYFLTI FAGTGNISLA TLPVIAEVAK
EQGIKPCRPL STAVVSAQIA ITASPISAAV VYMSSVMEGH GISYIHLLSV VIPSTLLAVL
VMSFLVTMLF NSKLSDDPIY RKRLEEGLIE LRGEKQIEIK PMAKNSVWLF LLGVICVVVY
AIVNSPSLGL VEKPLMNTTN AILIIMLSVA TLTTILCKVE TDAILNSSTF KAGMSACICI
LGVAWLGDTF VSANIDWIKD TAGSVIQGHP WLLAVIFFFA SALLYSQAAT AKALMPMALA
LNVSPLTAVA SFAAVSGLFI LPTYPTLVAA VQMDDTGTTR IGKFVFNHPF FIPGTLGVVL
AVCFGFLLGS FML