Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4661 |
Symbol | |
ID | 6484348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4551316 |
End bp | 4552191 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642739882 |
Product | AraC family regulatory protein |
Protein accession | YP_002043564 |
Protein GI | 194442792 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.81268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAG TATTTAATCC CTCACCTGTC CAGGTGGGGA GCATTGAATG TTTACAATCA GCGCAAAACT GGCAGAGGAA ATCCTTATCA CTTCAGGGAT TAAATTTACT GCAGTCCGTA CTCATCAAGC TCACCACGGG TAAAATTTCA ATTACGACAT CGTCCGGGGA GTATATTACG GCATCAGGGC CAATGTTAAT ATTTTTAGCT AAAGATCAAA CTATTCATAT CACTATGGAA GAGACTCATG AACAGTTAAA TTATAATTTA ATTGAATTAG ATTCTGCGTC AATAAAAAAT GCTTATAATT TTTTTCTGTA TGAACATGCA GACTTTTCGG CCCCATTAAC AAAACCGACG ACAAAACATC TGTTAGCGCC AATAGAAACA GGCGTAGCAA GAGTATTCAA CCTTTTACAC TCTTCAAATA AAAGCCAGAA ATTATCCCAA GATAAAAAGG AATATTTAAT AAGATTTCTA CTTTCAGAGT TCATCTATGA ACCTGAAGCA TTTGCCCTCT TTAGAGAACT ATCGCAAAAT ACATTAGCCG AAAATATCTA TAATATTATT ATAAGCGACA TAAGTCGAAA ATGGGCGCTC AAGGATATTT CTGACTCACT CTATATGAGT TGTTCCACAT TAAAAAGGAA ATTGAAACAA GAGAACACCT CATTCAGCGA AGTTTACCTT AATGCGCGAA TGAATAAAGC GACAAAACTT CTACGCAATA GTGAATATAA TATTACTCGA GTGGCTTATA TGTGTGGTTA TGATAGTGCT TCTTATTTTA CATGCGTTTT TAAAAAACAT TTCAAAACTA CACCATCGGA ATTTTTAGCG TTTTTATCTT CCTCTCGTCA TCAATATGTT AATTGA
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Protein sequence | MLKVFNPSPV QVGSIECLQS AQNWQRKSLS LQGLNLLQSV LIKLTTGKIS ITTSSGEYIT ASGPMLIFLA KDQTIHITME ETHEQLNYNL IELDSASIKN AYNFFLYEHA DFSAPLTKPT TKHLLAPIET GVARVFNLLH SSNKSQKLSQ DKKEYLIRFL LSEFIYEPEA FALFRELSQN TLAENIYNII ISDISRKWAL KDISDSLYMS CSTLKRKLKQ ENTSFSEVYL NARMNKATKL LRNSEYNITR VAYMCGYDSA SYFTCVFKKH FKTTPSEFLA FLSSSRHQYV N
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