Gene SNSL254_A4661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4661 
Symbol 
ID6484348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4551316 
End bp4552191 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content35% 
IMG OID642739882 
ProductAraC family regulatory protein 
Protein accessionYP_002043564 
Protein GI194442792 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.81268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAG TATTTAATCC CTCACCTGTC CAGGTGGGGA GCATTGAATG TTTACAATCA 
GCGCAAAACT GGCAGAGGAA ATCCTTATCA CTTCAGGGAT TAAATTTACT GCAGTCCGTA
CTCATCAAGC TCACCACGGG TAAAATTTCA ATTACGACAT CGTCCGGGGA GTATATTACG
GCATCAGGGC CAATGTTAAT ATTTTTAGCT AAAGATCAAA CTATTCATAT CACTATGGAA
GAGACTCATG AACAGTTAAA TTATAATTTA ATTGAATTAG ATTCTGCGTC AATAAAAAAT
GCTTATAATT TTTTTCTGTA TGAACATGCA GACTTTTCGG CCCCATTAAC AAAACCGACG
ACAAAACATC TGTTAGCGCC AATAGAAACA GGCGTAGCAA GAGTATTCAA CCTTTTACAC
TCTTCAAATA AAAGCCAGAA ATTATCCCAA GATAAAAAGG AATATTTAAT AAGATTTCTA
CTTTCAGAGT TCATCTATGA ACCTGAAGCA TTTGCCCTCT TTAGAGAACT ATCGCAAAAT
ACATTAGCCG AAAATATCTA TAATATTATT ATAAGCGACA TAAGTCGAAA ATGGGCGCTC
AAGGATATTT CTGACTCACT CTATATGAGT TGTTCCACAT TAAAAAGGAA ATTGAAACAA
GAGAACACCT CATTCAGCGA AGTTTACCTT AATGCGCGAA TGAATAAAGC GACAAAACTT
CTACGCAATA GTGAATATAA TATTACTCGA GTGGCTTATA TGTGTGGTTA TGATAGTGCT
TCTTATTTTA CATGCGTTTT TAAAAAACAT TTCAAAACTA CACCATCGGA ATTTTTAGCG
TTTTTATCTT CCTCTCGTCA TCAATATGTT AATTGA
 
Protein sequence
MLKVFNPSPV QVGSIECLQS AQNWQRKSLS LQGLNLLQSV LIKLTTGKIS ITTSSGEYIT 
ASGPMLIFLA KDQTIHITME ETHEQLNYNL IELDSASIKN AYNFFLYEHA DFSAPLTKPT
TKHLLAPIET GVARVFNLLH SSNKSQKLSQ DKKEYLIRFL LSEFIYEPEA FALFRELSQN
TLAENIYNII ISDISRKWAL KDISDSLYMS CSTLKRKLKQ ENTSFSEVYL NARMNKATKL
LRNSEYNITR VAYMCGYDSA SYFTCVFKKH FKTTPSEFLA FLSSSRHQYV N