Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4651 |
Symbol | |
ID | 6484538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4543000 |
End bp | 4545429 |
Gene Length | 2430 bp |
Protein Length | 809 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739873 |
Product | anaerobic dimethyl sulfoxide reductase chain a |
Protein accession | YP_002043555 |
Protein GI | 194443913 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases [TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0188549 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.28896 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATAA AAAAATGGCT GAACACAACC ATAACCCGAC GTGATGCTAT TGTCGCTACT GCAAAAGTAG GGGCGGCGGT GACGCTAAGC CAGGCGATTA CGCTGCCTTT TGCTACCACT GCCCAGGCGC AGGATACCCC GATACCGAAG GATGCCAACG GCGAAACCGT CAGGCACAGC GCCTGTCTGG TCAACTGTGG CAGTCGATGC CCGCTTAAGG TTATCGTGAA AAATGATCGC ATTGTGCGTA TTGAGCCGGA AGACGCGAAA GATGACGCGG TATTCGGCGA GCATCAGATT CGTCCCTGCC TGCGTGGGCG TTCCAGTCGC TGGCGCGTCT ATAGCCCGGA TCGCATTAAG TATCCGATGA AAAGAGTGGG AAAACGCGGC GAAGGAAAAT TTAAACGTAT TTCATGGGAT GAGGCCACGG CCTTTATTGC GGCGGAATTA ACGCGTGTTA GCGAACAATA TGGCCGGGAA GCTATTTATT ATAATTATCA ATCCGGGGCA TATTATCATA CGCAGGGATC GCCCGCCTGG AAGCGATTGT TAAATCTCAC CGGCGGCTAT TTAAATTACC ATAATACCTA CTCGACCGCG CAAATCGCGA CGGCAACGCC CTATATGCAT GGTACCTATG TCGGTAGCCA TTTTACGCAG ATCGCGCATT CCGATCTGGT GGTGCTATTT GGCCTGAATC TCTCAGAAAC GCGGATGTCC GGCGGCGGTC AGGTTGAAGA GCTGCGCCGG GCGCTGGAAA CCTCGAAAGC CCGAGTCATT ATTATCGATC CGCGCTATAC CGATTCGGTG ATTACCGAAC ACGCCGAATG GCTACCGATT CGCCCAACCA CGGACGCTGC GTTAGTCGCC GGCATAGCGC ATACGCTGAT TACCGAACAG CTTCTCGACG AGGCGCTGGT AAACCGCTAT TGCGTCGGTT ATGACCGTAG CACCTTGCCG GACACGGCTG CGCCTAACGC CAGCTATAAA GATTATGTTC TTGGCACGGG CGATGACGGT ATCGCGAAAA CCCCGGAATG GGCGGCGGAT ATCACCGGTA TTCCGGCAAC GCGTATTCGC CAACTGGCGC GCGAAATCGC CTCGGCGCGC GCCTGCTATA TTTGCCAGGG CTGGGGGCCG CAGCGTCATG CCAACGGCGA ACAAACCGTG CGTGCTATTC AGACGCTGCC AGCGTTAACA GGCCACTTCG GGCGGCCCGG CACCAACAAT GGCAACTGGC CTTACGGTAC GCCGTATGGC GTGCCATTGT TGCCTGTCGG TAAGAATCCG ATCACAACCT CTATTCCTTG CTATCTGTGG ACGGACGCCA TTCAGCATCC GGAGAAAATG ACCGCGACGA CAATGGGGGT GAAAGGCGCG GACAGGCTAA AAACCGGGAT TAAGCTGTTT TTCAACCAGG CCGGTAATAC CTTGCTGAAT CAGCACGGCG AAACGAACCG CACCCGACAA ATTCTCGCGG ATGAATCGCT GTGTGAAACC ATTATCGTGA TTGAAAACCA TATGACGCCC AGCGCGATGT ATGCGGATCT GCTGTTGCCG GAGACCAGCT ATCTTGAGGC GGAAGACCTG GTGGACAGCT CCTATGCGGC GGGATCGCAT AACTATATGA TTGCGATTCA GAAAACCGTT AAACCGATGT GGGAAGTGCG CAGCACGTAT GACATCTGCG CGGATATCGC CGGGCATCTT GGACTGCGCG AGCAATATAC CGAGGGCCGA ACTCAGGCGC AGTGGGCGGA GATGCACTAT CAGCAGATCC GTGAAAAACG TCCATACCTG CCGGAGTGGA GCGTGGCGAA AGAGATGGGT GTGATTGACC AGCGTATCGC TACCGAGCAG CAGAGCCTTG CGTTTGCCGA TTTCCGCGCC GACGCCGAGG CTAATCCACT CTCCACGCCG TCGGGCAAAA TTGAAATTTA CTCCCAGGCG CTGGCGGATC TGGCGCAAGC GTGGACGTTG CCAGAAGGCG AGCGAATTCC CGCATTGCCG GAATTTTGTC CGGCGAAAGA GTCGCACCTT AACAAAGCGC TGACGGCGAA GTATCCGTTG CAGTTAAGCG GCTTCCATAC CAAAGGGCAT ACCCACTCGA CCTACAGCAA TGTGCTGATG CTGCATGAGG CGGTGCCGGA TGAAGTCTGG ATTAACCCGA TTGACGCCAG CGCCCGCCAA CTGAAGTCCG GCGATCGGGT GCATGTATTC AATGACCGCG GCGTGGTGGA GCTTCCCTGT AAAGTGACCC AGCGCATTTT ACCCGGCGTG GCGGCGATGC CGCAGGGCGC GTGGACGCAG CTTGACGGCA ACGGCGTTGA TGTCGGCGGC TGTATCAATA CGCTGACCAG CCACCATCCT TCGCCGCTGG CGAAAGGCAA TCCGCAGCAT ACCAATCTGG TTGAAATTAA ACGCGCTTAA
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Protein sequence | MEIKKWLNTT ITRRDAIVAT AKVGAAVTLS QAITLPFATT AQAQDTPIPK DANGETVRHS ACLVNCGSRC PLKVIVKNDR IVRIEPEDAK DDAVFGEHQI RPCLRGRSSR WRVYSPDRIK YPMKRVGKRG EGKFKRISWD EATAFIAAEL TRVSEQYGRE AIYYNYQSGA YYHTQGSPAW KRLLNLTGGY LNYHNTYSTA QIATATPYMH GTYVGSHFTQ IAHSDLVVLF GLNLSETRMS GGGQVEELRR ALETSKARVI IIDPRYTDSV ITEHAEWLPI RPTTDAALVA GIAHTLITEQ LLDEALVNRY CVGYDRSTLP DTAAPNASYK DYVLGTGDDG IAKTPEWAAD ITGIPATRIR QLAREIASAR ACYICQGWGP QRHANGEQTV RAIQTLPALT GHFGRPGTNN GNWPYGTPYG VPLLPVGKNP ITTSIPCYLW TDAIQHPEKM TATTMGVKGA DRLKTGIKLF FNQAGNTLLN QHGETNRTRQ ILADESLCET IIVIENHMTP SAMYADLLLP ETSYLEAEDL VDSSYAAGSH NYMIAIQKTV KPMWEVRSTY DICADIAGHL GLREQYTEGR TQAQWAEMHY QQIREKRPYL PEWSVAKEMG VIDQRIATEQ QSLAFADFRA DAEANPLSTP SGKIEIYSQA LADLAQAWTL PEGERIPALP EFCPAKESHL NKALTAKYPL QLSGFHTKGH THSTYSNVLM LHEAVPDEVW INPIDASARQ LKSGDRVHVF NDRGVVELPC KVTQRILPGV AAMPQGAWTQ LDGNGVDVGG CINTLTSHHP SPLAKGNPQH TNLVEIKRA
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