Gene SNSL254_A4646 details

Gene Information

• Locus tag: SNSL254_A4646
• Symbol: fumB
• ID: 6484624
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: -
• Start bp: 4536466
• End bp: 4538112
• Gene Length: 1647 bp
• Protein Length: 548 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642739868
• Product: fumarate hydratase class I, anaerobic
• Protein accession: YP_002043550
• Protein GI: 194445135
• COG category: [C] Energy production and conversion
• COG ID: [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain; [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain
• TIGRFAM ID: [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 72
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCGAAAA AAGAGTTTAT CTATCAGGCG CCTTTCCCGA TGGGAGAGGA CAAAACAGAG 
TATTATCTGC TCACCTCCGA TTATGTCAGC GTCAGTGAAT TCAACGGAGA ATCTATCCTC 
AACGTTGAGC CGCAGGCGTT AACGTTGCTG GCTCAGCAGG CCTTCCATGA TGCGTCTTTT 
ATGCTCCGTC CTGAACACCA GCAGCAAGTC GCCGCCATTC TCCATGACCC CGAAGCCAGC 
GAAAACGACA AATATGTGGC GTTGCAATTC CTGAGAAACT CCGAAATCGC CGCCAAAGGC 
ATTCTGCCGA CCTGCCAGGA TACCGGCACG GCGATTATCA TGGGTAAAAA AGGCCAACGC 
GTCTGGACGG GCGGCGGCGA TGAAGCCGCG CTCTCCAAAG GCGTGTTTAA TACCTATATC 
GAAGATAACC TGCGCTACTC GCAGAACGCA CCGCTGGATA TGTACAAAGA GGTCAATACC 
GGCAGCAACC TGCCAGCGCA AATCGATCTC TATGCCGTCG ATGGCGACGA GTACAAGTTC 
CTTTGCGTGG CGAAAGGCGG CGGTTCAGCA AACAAAACGT ATCTCTATCA GGAGACCAAA 
GCGCTGCTCA CCCCAGGCAA GCTGAAAAAC TTCCTCGTTG AGAAAATGCG CACGCTGGGC 
ACCGCAGCCT GTCCGCCATA CCATATCGCC TTTGTCATTG GCGGCACCTC GGCGGAAAGC 
ACGCTGAAAA CCGTTAAGCT CGCCAGCACC CACTATTACG ACGCGCTGCC GACGGAAGGT 
AACGAGCACG GCCAGGCATT CCGCGATCTC CGCCTGGAAC AGGAACTGCT GGAAGAAGCG 
CAAAAACTTG GCCTCGGCGC CCAGTTCGGC GGGAAATATT TCGCCCACGA TATTCGCGTA 
ATTCGCCTGC CGCGTCACGG CGCTTCCTGT CCGGTGGGGA TGGGCGTCTC CTGCTCGGCC 
GACCGTAACA TCAAAGCGAA AATCAACCGC GAAGGCATCT GGATCGAAAA ACTGGAACAC 
AATCCGGGCC AGTATATTCC GCCAGCGCTG CGTCAGGCGG GCGAAGGCGA CGCGGTGAAA 
GTCGATCTCA ACCGTTCGAT GAAAGAGATC CTCGCCCAGC TATCGCAGTA CCCGGTCTCG 
ACTCGCCTGT CGCTGACGGG CACCATTATC GTAGGTCGCG ATATCGCCCA CGCGAAGCTA 
AAAGAGCGTA TTGAATCCGG CGAAGACCTG CCGCAGTATA TTAAAGACCA TCCCATCTAT 
TACGCAGGTC CGGCAAAAAC CCCGGCAGGT TATCCATCTG GTTCATTAGG CCCCACCACC 
GCAGGCCGAA TGGACTCTTA TGTCGATCTA CTGCAATCCC ACGGCGGCAG TATGATCATG 
CTGGCGAAAG GCAACCGTAG TCAGCAGGTC ACGGATGCCT GTAAAAAACA TGGCGGCTTT 
TATTTGGGCA GTATCGGCGG CCCGGCGGCG GTACTGGCAC AGCAGAGCAT TAAGCATCTG 
GAGTGCGTCG AGTATCCGGA ACTCGGCATG GAAGCTATCT GGAAAATTGA AGTAGAAGAT 
TTCCCGGCCT TTATCCTGGT GGATGACAAA GGCAACGATT TCTTCCAGCA GATTGTCAGC 
AAACAGTGCG CTAACTGCGC GAAATAA 

 

Protein sequence

MSKKEFIYQA PFPMGEDKTE YYLLTSDYVS VSEFNGESIL NVEPQALTLL AQQAFHDASF 
MLRPEHQQQV AAILHDPEAS ENDKYVALQF LRNSEIAAKG ILPTCQDTGT AIIMGKKGQR 
VWTGGGDEAA LSKGVFNTYI EDNLRYSQNA PLDMYKEVNT GSNLPAQIDL YAVDGDEYKF 
LCVAKGGGSA NKTYLYQETK ALLTPGKLKN FLVEKMRTLG TAACPPYHIA FVIGGTSAES 
TLKTVKLAST HYYDALPTEG NEHGQAFRDL RLEQELLEEA QKLGLGAQFG GKYFAHDIRV 
IRLPRHGASC PVGMGVSCSA DRNIKAKINR EGIWIEKLEH NPGQYIPPAL RQAGEGDAVK 
VDLNRSMKEI LAQLSQYPVS TRLSLTGTII VGRDIAHAKL KERIESGEDL PQYIKDHPIY 
YAGPAKTPAG YPSGSLGPTT AGRMDSYVDL LQSHGGSMIM LAKGNRSQQV TDACKKHGGF 
YLGSIGGPAA VLAQQSIKHL ECVEYPELGM EAIWKIEVED FPAFILVDDK GNDFFQQIVS 
KQCANCAK