Gene SNSL254_A4643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4643 
Symbol 
ID6484311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4532298 
End bp4533188 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content52% 
IMG OID642739865 
ProductDNA-binding transcriptional regulator MelR 
Protein accessionYP_002043547 
Protein GI194444626 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAACG GCGATGAAAA GCAAACCCGT AGCCCGCTGT CGCTCTATTC CGAATATCAA 
CGACTGGACG TTGAACTGAG GCCGCCGCAC AGAATGGCCA GCAGTCACTG GCATGGGCAA
GTAGAAGTGA ATGTTCCGTT TGACGGCGAT GTGGAGTATT TAATCAACAA TGAAGTCGTG
CAGATAAAGC AGGGGCATAT CACCCTGTTT TGGGCCTGTA CGCCACACCA GCTTACCCGC
CCCGGCAACT GCCGCCAGAT GGCGATTTTC AGTTTGCCGA TGCACCTGTT TCTCTCCTGG
CCGCTGGATC GCGATCTTAT CAACCACGTC ACGCACGGGA TGGTGGTTAA ATCACTGGCG
ACCCAGCAGC TTAGCACCTT TGAAGTGTTG CGCTGGCAGC AGGAAACAAG CAGCCCGAAT
GAGCAAATTC GCCAGTTGGC GATCGATGAA ATCGGCCTGA TGCTTAAACG CTTTAGCCTT
TCCGGCTGGC AGCCCATTTT GCTCAATAAA ACATCACGCA CCCACAAGAA TAGCGTCTCA
CGCCATGCGC AGTTTTACGT AAGCCAGATG CTGGGATTTA TTGCCGATAA CTACGATCAG
GCGCTCACCA TTAACGACGT CGCGGAGCAT GTCAAACTCA ATGCTAATTA CGCGATGGGA
ATATTCCAGC GGGTTATGCA ATTGACGATG AAGCAGTACA TCACGGCGAT GCGCATCAAT
CACGTACGTG CCTTATTGAG CGATACTGAC AAAACGATCC TCGATGTCGC TCTGACTGCC
GGGTTCCGAT CCAGCAGCCG TTTTTACAGT ACTTTTAGCA AATTTGTCGG TATGTCGCCG
CAACAATACC GCAAGCTAAG CCAGCAACGA CGCCAGACGA TGCCCGGCTA A
 
Protein sequence
MCNGDEKQTR SPLSLYSEYQ RLDVELRPPH RMASSHWHGQ VEVNVPFDGD VEYLINNEVV 
QIKQGHITLF WACTPHQLTR PGNCRQMAIF SLPMHLFLSW PLDRDLINHV THGMVVKSLA
TQQLSTFEVL RWQQETSSPN EQIRQLAIDE IGLMLKRFSL SGWQPILLNK TSRTHKNSVS
RHAQFYVSQM LGFIADNYDQ ALTINDVAEH VKLNANYAMG IFQRVMQLTM KQYITAMRIN
HVRALLSDTD KTILDVALTA GFRSSSRFYS TFSKFVGMSP QQYRKLSQQR RQTMPG