| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4638 |
|---|
| Symbol | |
|---|
| ID | 6483659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4524820 |
|---|
| End bp | 4525488 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642739860 |
|---|
| Product | DNA-binding transcriptional regulator BasR |
|---|
| Protein accession | YP_002043542 |
|---|
| Protein GI | 194446648 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAC TGATTGTTGA AGACGACACG CTATTATTAC AGGGGTTAAT ACTCGCCGCG
CAAACCGAAG GCTATGCGTG TGATGGCGTT TCGACAGCGC GTGCCGCCGA GCATAGTCTG
GAGTCTGGTC ATTACAGTCT GATGGTGCTG GATTTAGGGC TGCCCGATGA GGATGGCCTG
CATTTCCTGA CGCGAATCCG ACAGAAAAAA TATACCCTGC CGGTACTCAT TCTGACCGCC
CGCGATACGC TCAATGACCG CATTACCGGG CTGGATGTCG GCGCAGATGA TTATCTGGTT
AAACCCTTCG CCCTGGAGGA GTTGCACGCC CGCATCCGCG CGCTGCTGCG CCGCCATAAT
AACCAGGGTG AAAGTGAACT GACGGTTGGC AATCTGACGC TCAATATAGG CCGCCATCAG
GCATGGAGGG ATGGACAGGA ACTGACCCTG ACGCCTAAGG AGTACGCGCT GCTCTCACGG
TTGATGCTCA AGGCAGGCAG TCCGGTGCAC CGGGAAATTC TTTATAACGA TATCTACAAC
TGGGATAACG AACCCTCGAC CAACACTCTG GAAGTGCATA TACATAATTT GCGCGACAAA
GTCGGCAAGT CGCGCATTCG CACGGTTCGC GGGTTTGGCT ACATGCTGGT TGCCACTGAG
GAAAGCTAA
|
|---|
| Protein sequence | MKILIVEDDT LLLQGLILAA QTEGYACDGV STARAAEHSL ESGHYSLMVL DLGLPDEDGL
HFLTRIRQKK YTLPVLILTA RDTLNDRITG LDVGADDYLV KPFALEELHA RIRALLRRHN
NQGESELTVG NLTLNIGRHQ AWRDGQELTL TPKEYALLSR LMLKAGSPVH REILYNDIYN
WDNEPSTNTL EVHIHNLRDK VGKSRIRTVR GFGYMLVATE ES
|
|---|
| |