| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4629 |
|---|
| Symbol | |
|---|
| ID | 6484658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 4515585 |
|---|
| End bp | 4516253 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642739853 |
|---|
| Product | tetratricopeptide repeat protein |
|---|
| Protein accession | YP_002043535 |
|---|
| Protein GI | 194445386 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGTTTA TGACATTCTT TGCCCATGCC GCAGATCCTG AGCCGGGTAG CCAGTATTTG
CAGGCAGCAG AGGCAGGTGA CAGACGCGCA CAATATTTTC TGGCCGACAG TTGGTTGAGC
TATGGCGATT TGAACAAAGC TGAATACTGG GCGCAAAAAG CCGCCGACAG TGGCGACGCC
GACGCCTGCG CGCTACTGGC GCAAATCAAA ATCACTAATC CGGTAAGCCT GGATTATCCC
GACGCGAAAA AGCTGGCTGA AAAGGCGGCT AACGCGGGCA GTAAAGCGGG AGAAATTACG
CTGGCGCGGA TCCTGGTCAA CACCCAGGCC GGGCGCCCGG ACTACCCAAA AGCCATCTCG
CTGCTGCAAA AGGCCTCTGA AGATCTGGAT AACGACTCCG CGGTGGATGC GCAAATGTTG
CTTGGCCTGA TTTACGCCAA CGGCGTGGGC ATTGCCGCCG ATGATGAAAA AGCCGCCTGG
TATTTCAAAC GCAGTTCCGC TATTTCCCGT ACCGGCTATT CAGAATACTG GGCGGGAATG
ATGTTTTTAA ACGGTGAACC GGGCTTTATT GAAAAGAACA AGCAGAAGGC GTTGCACTGG
TTGAATCTAA GCTGTCTGGA AGGGTTTGAT ACCGGTTGCG AAGAGTTCGA AACGCTAACG
AATGGCTGA
|
|---|
| Protein sequence | MLFMTFFAHA ADPEPGSQYL QAAEAGDRRA QYFLADSWLS YGDLNKAEYW AQKAADSGDA
DACALLAQIK ITNPVSLDYP DAKKLAEKAA NAGSKAGEIT LARILVNTQA GRPDYPKAIS
LLQKASEDLD NDSAVDAQML LGLIYANGVG IAADDEKAAW YFKRSSAISR TGYSEYWAGM
MFLNGEPGFI EKNKQKALHW LNLSCLEGFD TGCEEFETLT NG
|
|---|
| |