Gene SNSL254_A4624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4624 
SymbolnrfC 
ID6482672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4509316 
End bp4509987 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID642739848 
Productcytochrome c nitrite reductase, Fe-S protein 
Protein accessionYP_002043530 
Protein GI194446804 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03149] cytochrome c nitrite reductase, Fe-S protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGCA CCCGACGTCA ATTTATTACC CGCGTCGGCG CGCTGGCGGC GATCAGTGGG 
ATGGCAGGAC GCGTTGTAGC GAACACGTTG AATATTAACG GCGTGCGTTA CGGTATGGTA
CACGATGAGT CATTATGCAT CGGCTGCACG GCCTGCATGG ATGCCTGTCG GGAAGTCAAC
AACGTGCCGG AAGGCGTATC GCGCCTGACG ATTATCCGCA GCGAGCCGCA GGGAACGTTT
CCTGATGTGA AGTATCGCTT CTTCCGCCAC TCGTGCCAGC ATTGCGACCA TGCCCCCTGC
GTTGACGTCT GCCCGACGGG GGCATCATTC CGCGATGCCG CCAATGGCAT TGTGGATGTG
AACCCGGACC TTTGCGTCGG CTGCCAGTAC TGCATTGCCG CGTGTCCCTA CCGCGTGCGC
TTTATCCATC CGGTCAGTAA GACGGCGGAT AAGTGCGATT TCTGCCGGAA AACCAACCTG
AAAGCGGGCA AACAGCCCGC CTGCGTTGAG TCATGCCCGA CGAAGGCGCT GACGTTTGGT
AATCTGGACG ATCCCAACAG CGATATCTCC CGTTTGTTGC GGCAAAAAAC TACCTATCGC
TACAAGCTGG CGCTGGGCAC AAAACCGAAG GTCTACCGCG TTCCCTTTAA CTATGGGGAG
GTGAGCCAAT GA
 
Protein sequence
MSCTRRQFIT RVGALAAISG MAGRVVANTL NINGVRYGMV HDESLCIGCT ACMDACREVN 
NVPEGVSRLT IIRSEPQGTF PDVKYRFFRH SCQHCDHAPC VDVCPTGASF RDAANGIVDV
NPDLCVGCQY CIAACPYRVR FIHPVSKTAD KCDFCRKTNL KAGKQPACVE SCPTKALTFG
NLDDPNSDIS RLLRQKTTYR YKLALGTKPK VYRVPFNYGE VSQ