Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4622 |
Symbol | nrfA |
ID | 6483130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4507272 |
End bp | 4508708 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739846 |
Product | cytochrome c552 |
Protein accession | YP_002043528 |
Protein GI | 194443176 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGA AAACACTACG CGCACGCCGT TTCTTCAGCC TTATATTTCC TTTTTTCTTC ATTACCTCTG TTTACGCTGA GCAAACGCCT GAATCCGCAA AAACCGTTAC TGTTGAAGCG AAAAATGAAA TGTTCGCGCC TCAACACCCC GACCAATATC AGTCATGGAA AGCGACGTCA GAACAGTCTG CCCGTGAAGA TGCGCTGGCG GAAGACCCTC GTCTGGTGAT CCTGTGGGCG GGCTATCCCT TCTCCCGTGA TTACAACAAA CCACGCGGCC ACGCGTATGC GGTAACTGAC GTGCGCGAAA CACTGCGTAC CGGCGCGCCA AAAACGGCGG AAGACGGCCC GCTGCCGATG GCCTGCTGGA GTTGTAAAAG CCCCGATGTC GCGCGCCTTA TCCAACAAGA AGGCGAAGAC GGCTACTTCC ATGGCAAATG GGCGCGAGGC GGCCCGGAAA TTGTCAACGA TTTGGGCTGT GCCGACTGTC ATAACACCGC GTCGGACGAT TTCGCCCAGG GGAAGCCAGC GTTAACGTTG TCGCGCCCCT ATGCCGAACG GGCGATGGAG GCTATCGGCA AACCGTTTGA TAAAGCGGGA CGATTTGATC AGCAATCGAT GGTCTGCGGT CAGTGCCACG TGGAGTACTA CTTTGACGGT AAAAACAAAG CCGTTAAGTT CCCGTGGGAT GAGGGCATGA AGGTCGAAAA TATGGAGCAA TACTACGACG CCATCGCCTT CTCCGACTGG ACTAACTCGC TGTCGAAAAC CCCAATGCTC AAAGCGCAGC ACCCGGAATA TGAAACCTGG AGCGCGGGCA TTCACGGTAA GAACAACGTG ACCTGTATCG ACTGTCACAT GCCGAAAGTA CAGAACGCCG AAGGCAAGCT CTACACCGAC CATAAAATCG GCAACCCGTT CGACAATTTC GCGCAAACCT GCGCCAACTG CCACACCCAG GACAAAGCGT CCCTGCAAAA AGTGGTCGCC GAGCGTAAAC AGGCGATTCA TGACCTGAAA ATCAAGGTTG AAGATCAGCT GGTACATGCG CACTTCGAAG CGAAAGCCGC ATGGGATGCG GGGGCGACAG ACGCGGAAAT GAAACCGATT CTGAACGATA TTCGCCACGC GCAGTGGCGT TGGGATCTGG CGATTGCGTC ACACGGTATT CATATGCATG CCCCGGAAGA AGGTCTACGG ATGTTAGGCA GTGCGATGGA TAAAGCCGCG GATGCCCGTA CTAAACTGGC GCGACTGCTG GCGACCAAAG GCATTACCCA TGAAATTCCG CTGCCGGATA TTTCGACGAA AGAGAAGGCG CAGAAAGCGA TTGGTTTGAA TATGCAACAA ATCAACGCGG AGAAGCAGGA CTTCCTGAAA ACGGTCGTAC CGCAGTGGGA AGATCAGGCG CGTAAAAACG GTCTGTTAAG CCAATAA
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Protein sequence | MARKTLRARR FFSLIFPFFF ITSVYAEQTP ESAKTVTVEA KNEMFAPQHP DQYQSWKATS EQSAREDALA EDPRLVILWA GYPFSRDYNK PRGHAYAVTD VRETLRTGAP KTAEDGPLPM ACWSCKSPDV ARLIQQEGED GYFHGKWARG GPEIVNDLGC ADCHNTASDD FAQGKPALTL SRPYAERAME AIGKPFDKAG RFDQQSMVCG QCHVEYYFDG KNKAVKFPWD EGMKVENMEQ YYDAIAFSDW TNSLSKTPML KAQHPEYETW SAGIHGKNNV TCIDCHMPKV QNAEGKLYTD HKIGNPFDNF AQTCANCHTQ DKASLQKVVA ERKQAIHDLK IKVEDQLVHA HFEAKAAWDA GATDAEMKPI LNDIRHAQWR WDLAIASHGI HMHAPEEGLR MLGSAMDKAA DARTKLARLL ATKGITHEIP LPDISTKEKA QKAIGLNMQQ INAEKQDFLK TVVPQWEDQA RKNGLLSQ
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