| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4617 |
|---|
| Symbol | |
|---|
| ID | 6486261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4501545 |
|---|
| End bp | 4501955 |
|---|
| Gene Length | 411 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642739841 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_002043523 |
|---|
| Protein GI | 194446698 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTGG CGATAAGCCG CGTTACGCCT GCCGTTGTGC AACGACTCCA GGTACCGGTT
CAGGTACTGC TCTATGCAGG TTTATTCATT TTTTCCCAAT ATCTTGTCTC CTGGCTGCAC
CTGCCGTTGC CCGCGAATCT GGTCGGCATG GTGCTTATGT TGGCGCTGAT CGTTTGCCGG
ATTATTCCGC TTAGCTGGGT ACGCGCAGGC GCACGCTGGC TGCTGGCGGA GATGCTGTTA
TTCTTTGTTC CCGCCGTCGT GGCGGTAGTG AACTATGCCC ATCTGTTACT GGTGGACGGC
TGGCGCATTT TCTCGGTGAT AGCGATCAGT ACCTTAATGG TACTCGGCGC GACGGCGTGG
GTGGTGGATA AAGTGTATCG CTATGAGATG AGTAGGCTAA ACCGTGAATA A
|
|---|
| Protein sequence | MAVAISRVTP AVVQRLQVPV QVLLYAGLFI FSQYLVSWLH LPLPANLVGM VLMLALIVCR
IIPLSWVRAG ARWLLAEMLL FFVPAVVAVV NYAHLLLVDG WRIFSVIAIS TLMVLGATAW
VVDKVYRYEM SRLNRE
|
|---|
| |