Gene SNSL254_A4588 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4588 
Symbol 
ID6485811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4456711 
End bp4457694 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content56% 
IMG OID642739813 
Productquinone oxidoreductase, NADPH-dependent 
Protein accessionYP_002043495 
Protein GI194443299 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGC GTATTGAATT TCACAAGCAT GGTGGTCCGG AAGTGCTTCA GACCGTGGAG 
TTTACGCCAA CGGAACCGGC GGAACACGAA ATCCAGGTTG AGAACAAAGC CATTGGTATC
AACTTCATCG ACACCTATAT CCGTAGCGGA CTCTATCCGC CCCCGTCGTT GCCTGCGGGC
CTGGGAACCG AAGCTGCGGG TGTGGTCAGT AAAGTCGGCA ACGGCGTGGA GCACATTCGC
GTGGGCGATC GCGTCGTCTA CGCGCAGTCA ACGCTCGGCG CTTACAGTTC CGTCCATAAC
GTCCCCGCAG ATAAAGCCGC GATTTTACCT GACGCCATTT CCTTCGAACA GGCGGCAGCC
TCTTTTCTCA AGGGGTTGAC CGTTTTTTAC CTGTTGCGCA AAACCTATGA AGTGAAACCC
GACGAACCCT TCCTGTTTCA TGCCGCTGCG GGCGGCGTCG GTCTGATCGC CTGCCAATGG
GCAAAAGCGC TGGGCGCGAA GCTTATCGGT ACCGTCGGTA GCGCGCAAAA AGCGCAGCGG
GCGCTGGACG CCGGTGCCTG GCAGGTAATT AATTACCGTG AGGAGAGCAT TGTCGAACGG
GTAAAAGAGA TCACCGGCGG CAAAAAAGTC CGCGTGGTCT ATGACTCCGT GGGGAAAGAT
ACCTGGGAAG CCTCACTGGA CTGCCTGCAA CGACGGGGAC TGATGGTCAG TTTCGGCAAT
GCGTCCGGCC CCGTCACTGG CGTGAATTTA GGTATTCTGA ATCAGAAAGG TTCCCTGTAT
GCCACGCGAC CTTCACTACA GGGGTATATT ACGACACGTG AAGAACTGAC CGAAGCCAGC
AATGAATTGT TCTCATTGAT CGCCAGCGGC GTGATTAAAG TTGATGTGGC TGAAAATCAA
CGCTATGCGT TAAAAGATGC CCGTCGCGCG CATGAGGTAC TGGAAAGCCG GGCCACACAG
GGCTCAAGCC TGCTGATTCC GTAA
 
Protein sequence
MATRIEFHKH GGPEVLQTVE FTPTEPAEHE IQVENKAIGI NFIDTYIRSG LYPPPSLPAG 
LGTEAAGVVS KVGNGVEHIR VGDRVVYAQS TLGAYSSVHN VPADKAAILP DAISFEQAAA
SFLKGLTVFY LLRKTYEVKP DEPFLFHAAA GGVGLIACQW AKALGAKLIG TVGSAQKAQR
ALDAGAWQVI NYREESIVER VKEITGGKKV RVVYDSVGKD TWEASLDCLQ RRGLMVSFGN
ASGPVTGVNL GILNQKGSLY ATRPSLQGYI TTREELTEAS NELFSLIASG VIKVDVAENQ
RYALKDARRA HEVLESRATQ GSSLLIP