| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4581 |
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| Symbol | |
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| ID | 6486770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4451203 |
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| End bp | 4452528 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642739807 |
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| Product | DNA-damage-inducible SOS response protein |
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| Protein accession | YP_002043489 |
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| Protein GI | 194446191 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.941537 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTT TTACCTCCTC TGATAAAGCT CTCTGGCATC TCGCGCTGCC GATGATTTTT
TCTAACATCA CCGTCCCCTT GCTGGGGCTG GTCGATACGG CGGTGATTGG TCATCTGGAC
AGCCCGGTTT TCCTGGGCGG CGTGGCGGTG GGCGCGACTG CCACCAGCTT TCTTTTCATG
CTGCTGCTAT TTCTACGTAT GAGCACCACC GGCCTAACGG CGCAGGCATT TGGCGCCAAA
AATCCGCAGG CGTTAGCCCG GGCGCTCATT CAACCGTTAT TACTGGCGCT GGGCGCTGGC
GTGATGATTG TGCTATTTCG CACGCCGCTT ATCGAGCTGG CTTTACATAT TGTCGGCGGG
AACGACGCTG TCCTGGTGCA AGCGAGACGC TTCCTTGAAA TTCGTTGGCT AAGCGCTCCC
GCGTCACTGG CGAATCTGGT GCTGCTCGGT TGGCTGTTAG GCGTTCAGTA TGCGCGGGCG
CCGGTTATCT TGTTGGTCGT GGGCAATATC CTCAATATCG CGCTCGACCT GTGGCTGGTG
ATGGGGCTTC ATATGAACGT GCAGGGTGCT GCCCTGGCGA CGGTCATCGC AGAATATGTC
ACGTTACTGA TCGGCCTCAT GATGGTACGT AAAGTTCTCC ATCTCCGCGG TGTGTCGCTG
GATATGCTAA AACAGGCCTG GCGCGGCAAC GTGCGCCGCC TTTTGGCGCT CAATCGCGAT
ATCATGCTGC GCTCATTGCT CCTTCAGCTT TGTTTTGGCG CAATCACGGT GTCAGGCGCG
CGGCTGGGCA GCGATATTAT CGCGGTAAAT GCAGTCCTGA TGACCTTACT CACCTTTACG
GCCTATGCGC TGGACGGTTT TGCTTATGCG GTGGAGGCGC ACTCCGGTCA GGCTTACGGC
GCGCGTGACG GTAGCAAGCT ACTGGACGTC TGGCGAGCGG CGTGTCGTCA GTCAGGAATT
GTGGCCTTGT TGTTTTCCAC AGTCTATGCC CTGGCAGGCG AACATATTGT CGCGTTACTG
ACCTCATTGC CGCAAATACA GCTACTGGCG GATCGGTATC TTATCTGGCA GGTGGTATTA
CCGCTGGTGG GCGTATGGTG CTATCTGCTC GACGGTATGT TTATTGGCGC GACGCGCGCT
GCCGAAATGC GCAATAGCAT GGCAGTCGCC GCGGGAGGAT TCGCGCTGAC GCTCTTCGCC
CTGCCGGTAT TAGGAAATCA TGGTTTATGG CTGGCATTAA CCGTGTTCCT GGCGCTTCGC
GGTCTGTCGT TGAGCCTTAT CTGGCGTCGT CACTGGCGCG AGGGTACATG GTTTGCCAGA
TCGTGA
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| Protein sequence | MPLFTSSDKA LWHLALPMIF SNITVPLLGL VDTAVIGHLD SPVFLGGVAV GATATSFLFM
LLLFLRMSTT GLTAQAFGAK NPQALARALI QPLLLALGAG VMIVLFRTPL IELALHIVGG
NDAVLVQARR FLEIRWLSAP ASLANLVLLG WLLGVQYARA PVILLVVGNI LNIALDLWLV
MGLHMNVQGA ALATVIAEYV TLLIGLMMVR KVLHLRGVSL DMLKQAWRGN VRRLLALNRD
IMLRSLLLQL CFGAITVSGA RLGSDIIAVN AVLMTLLTFT AYALDGFAYA VEAHSGQAYG
ARDGSKLLDV WRAACRQSGI VALLFSTVYA LAGEHIVALL TSLPQIQLLA DRYLIWQVVL
PLVGVWCYLL DGMFIGATRA AEMRNSMAVA AGGFALTLFA LPVLGNHGLW LALTVFLALR
GLSLSLIWRR HWREGTWFAR S
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