Gene SNSL254_A4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4580 
SymbollexA 
ID6484892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4450416 
End bp4451024 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID642739806 
ProductLexA repressor 
Protein accessionYP_002043488 
Protein GI194446691 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.285079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGT TAACGGCCAG GCAACAAGAG GTGTTTGATC TCATCCGGGA TCACATCAGC 
CAGACAGGTA TGCCACCGAC GCGTGCGGAA ATCGCGCAGC GTTTGGGGTT CCGTTCCCCA
AACGCTGCGG AAGAACACCT TAAAGCGCTG GCGCGCAAAG GGGTGCTTGA AATCGTTTCC
GGCGCATCGC GAGGTATCCG TCTGTTACAG GAAGAAGAGG ACGGATTACC GCTTGTCGGG
CGTGTCGCGG CGGGTGAACC GCTTCTGGCG CAGCAGCATA TTGAAGGCCA TTACCAGGTC
GATCCTTCGC TGTTCAAACC CAGCGCCGAT TTCCTGCTGC GCGTGAGCGG TATGTCGATG
AAAGACATCG GTATTATGGA TGGGGATTTG CTGGCGGTAC ATAAAACGCA GGACGTCCGT
AATGGCCAGG TGGTTGTCGC TCGCATTGAC GATGAAGTGA CAGTAAAACG CCTGAAAAAG
CAGGGCAATA AAGTGGAGCT GCTGCCGGAA AACAGCGAGT TTACACCGAT AGTGGTGGAT
CTGCGCGAAC AAAGCTTTAC GATTGAAGGG CTGGCGGTAG GCGTCATTCG CAACGGGGAA
TGGTTGTAA
 
Protein sequence
MKALTARQQE VFDLIRDHIS QTGMPPTRAE IAQRLGFRSP NAAEEHLKAL ARKGVLEIVS 
GASRGIRLLQ EEEDGLPLVG RVAAGEPLLA QQHIEGHYQV DPSLFKPSAD FLLRVSGMSM
KDIGIMDGDL LAVHKTQDVR NGQVVVARID DEVTVKRLKK QGNKVELLPE NSEFTPIVVD
LREQSFTIEG LAVGVIRNGE WL