Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4574 |
Symbol | lamB |
ID | 6482227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4443246 |
End bp | 4444604 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642739800 |
Product | maltoporin |
Protein accession | YP_002043482 |
Protein GI | 194445221 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0364773 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTA CTCTGCGCAA ACTCCCACTG GCAGTTGCTG TCGCAGCGGG CGTAATGTCC GCTCAGGCAA TGGCTGTCGA TTTCCACGGT TACGCCCGTT CCGGTATTGG CTGGACGGGA AGCGGCGGCG AACAACAATG TTTCCAAGTG ACCGGTGCAC AAAGTAAATA CCGTCTTGGT AACGAATGTG AAACCTATGC GGAACTGAAA CTGGGCCAGG AAGTGTGGAA AGAGGGCGAT AAGAGCTTCT ATTTCGACAC CAACGTCGCC TATTCGGTTA ACCAGCAGAA CGACTGGGAA TCGACCGATC CCGCCTTCCG CGAAGCGAAC GTGCAGGGTA AAAACCTGAT TGAATGGCTG CCGGGCTCTA CCATCTGGGC CGGTAAGCGC TTCTATCAGC GTCATGACGT ACACATGATC GACTTCTACT ACTGGGATAT TTCAGGTCCT GGCGCAGGTA TCGAAAATAT CGATCTGGGC TTCGGTAAGC TTTCACTGGC GGCGACCCGG TCTACTGAAG CGGGCGGCTC TTACACCTTC AGCAGCCAGA ATATTTATGA TGAAGTGAAA GATACCGCTA ACGACGTCTT TGACGTACGC CTGGCTGGTC TGCAAACGAA CCCGGACGGC GTACTGGAGC TGGGCGTTGA TTACGGCCGC GCCAATACGA CCGATGGTTA TAAGCTGGCG GATGGGGCAT CGAAAGACGG CTGGATGTTC ACCGCCGAAC ACACGCAAAG CATGTTGAAA GGCTATAACA AGTTTGTCGT GCAATATGCC ACCGATGCCA TGACCACGCA GGGTAAAGGC CAGGCGCGCG GTTCCGACGG TTCTTCATCT TTCACTGAAG AATTGCCTGA TGGAACCAAA ATTAATTATG CCAATAAGGT CATCAACAAT AATGGCGATA TGTGGCGTAT TTTGGATCAT GGCGCCATCT CGCTTGGTGA TAAATGGGAT TTGATGTACG TCGGTATGTA CCAGAATATC GATTGGGATA ATAACCTGGG TACTGAGTGG TGGACCGTGG GCGTACGTCC AATGTACAAG TGGACGCCAA TCATGAGTAC CCTGCTGGAA GTCGGCTACG ACAACGTGAA ATCTCAGCAG ACCGGCGATC GTAACAATCA ATATAAAATC ACCCTGGCGC AACAGTGGCA GGCGGGCGAC AGCATCTGGT CGCGTCCGGC TATCCGTATT TTCGCCACCT ACGCGAAATG GGATGAGAAG TGGGGCTATA TCAAAGACGG CGATAACATT TCCCGTTATG CCGCAGCGAC TAACTCCGGC ATTTCCACCA ACAGCCGTGG CGATAGCGAT GAGTGGACCT TCGGCGCCCA GATGGAAATC TGGTGGTAA
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Protein sequence | MMITLRKLPL AVAVAAGVMS AQAMAVDFHG YARSGIGWTG SGGEQQCFQV TGAQSKYRLG NECETYAELK LGQEVWKEGD KSFYFDTNVA YSVNQQNDWE STDPAFREAN VQGKNLIEWL PGSTIWAGKR FYQRHDVHMI DFYYWDISGP GAGIENIDLG FGKLSLAATR STEAGGSYTF SSQNIYDEVK DTANDVFDVR LAGLQTNPDG VLELGVDYGR ANTTDGYKLA DGASKDGWMF TAEHTQSMLK GYNKFVVQYA TDAMTTQGKG QARGSDGSSS FTEELPDGTK INYANKVINN NGDMWRILDH GAISLGDKWD LMYVGMYQNI DWDNNLGTEW WTVGVRPMYK WTPIMSTLLE VGYDNVKSQQ TGDRNNQYKI TLAQQWQAGD SIWSRPAIRI FATYAKWDEK WGYIKDGDNI SRYAAATNSG ISTNSRGDSD EWTFGAQMEI WW
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