Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4571 |
Symbol | malF |
ID | 6483258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4438820 |
End bp | 4440364 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642739796 |
Product | maltose transporter membrane protein |
Protein accession | YP_002043478 |
Protein GI | 194442589 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0143691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTCA TTAAAAAGAA ACACTGGTGG CAAAGTGACC AGCTTAAATG GTCAGTAATT GGTCTGCTGG GCCTGCTGGT GGGTTACCTT GTAGTTTTAA TGTACGTACA AGGGGAGTAT CTGTTCGCCA TCATGACGCT GATTTTAAGC TCTGCTGGCC TGTATATTTT CGCAAATCGT AAAACCTATG CCTGGCGCTA CGTTTACCCT GGCCTCGCCG GCATGGGGCT ATTTGTGCTA TTCCCGCTGG TGTGCACCAT CGCTATCGCC TTTACTAACT ACAGCAGCAC CAACCAGCTC ACCTTTGAAC GCGCCCAGCA AGTGCTGATG GACCGTTCTT ATCAGGCGGG AAAAACCTAT AACTTCGGTC TTTACCCGAC CGGCGACGAG TGGCAACTGG CCCTTACCGA CGGAGAAACG GGCAAACATT ACCTGTCTGG CGCATTTTCC TTCGGCGGCG AACAAAAATT ACAGCTGAAA GAGACCGATG CCCTGCCGGG CGGCGAACGC GCCAATCTGC GGATAATCAC CCAGAACCGT CTGGCGTTGA ACCAGATAAC CGCCGTCCTG CCGGATGAAA GTAAAGTGAT TATGAGCTCG CTGCGTCAGT TTTCCGGTAC CCGTCCGCTG TACACACTGG CTGATGACGG CCTGCTTACC AATAACCAGA GCGGCGTAAA ATACCGGCCA AATAACGATA GCGGTTATTA TCAGTCGATC AACGCCGACG GAAGCTGGGG CGATGAAAAA CTCAGTCCTG GTTATACCGT TACTATCGGC GCGAAAAACT TTACGCGCGT CTTTACCGAC GAAGGGATCC AGAAGCCTTT TTTCGCTATC TTCGTCTGGA CCGTGGTCTT TTCGGTCCTC ACTGTGGTGT TAACCGTGGC GGTTGGGATG GTATTGGCCT GCCTCGTACA GTGGGAAGCG CTGAAAGGTA AAGCTATCTA CCGCGTCCTG CTGATTCTGC CCTACGCCGT ACCGTCGTTT ATTTCAATTT TGATTTTCAA AGGGTTATTC AACCAAAGCT TTGGCGAAAT CAATATGATG CTGAGCGCGC TGTTTGGCAT TAAACCTGCC TGGTTCAGCG ACCCCAACAC CGCGCGGGCA ATGGTGATTA TCGTGAATAC CTGGCTGGGC TATCCCTACA TGATGATCCT GTGCATGGGA CTGCTGAAAG CGATTCCGGA TGACCTGTAC GAAGCCTCCG CAATGGACGG CGCCGGTCCA TTTCAGAATT TCTTTAAGAT CACCTTACCG CTGCTGATTA AGCCGCTAAC GCCGCTGATG ATCGCCAGCT TCGCCTTTAA CTTTAATAAC TTTGTCCTGA TTCAGTTATT GACCAACGGC GGGCCAGACC GTCTCGGCAC CACCACGCCT GCCGGTTATA CCGATTTGCT CGTCAGCTAC ACCTACCGTA TCGCCTTTGA AGGCGGCGGC GGTCAGGACT TCGGTCTGGC GGCGGCCATT GCCACGCTGA TCTTCCTGCT GGTAGGCGCG CTGGCAATAG TGAACCTGAA AGCCACGCGT ATGAAGTTTG ATTAA
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Protein sequence | MDVIKKKHWW QSDQLKWSVI GLLGLLVGYL VVLMYVQGEY LFAIMTLILS SAGLYIFANR KTYAWRYVYP GLAGMGLFVL FPLVCTIAIA FTNYSSTNQL TFERAQQVLM DRSYQAGKTY NFGLYPTGDE WQLALTDGET GKHYLSGAFS FGGEQKLQLK ETDALPGGER ANLRIITQNR LALNQITAVL PDESKVIMSS LRQFSGTRPL YTLADDGLLT NNQSGVKYRP NNDSGYYQSI NADGSWGDEK LSPGYTVTIG AKNFTRVFTD EGIQKPFFAI FVWTVVFSVL TVVLTVAVGM VLACLVQWEA LKGKAIYRVL LILPYAVPSF ISILIFKGLF NQSFGEINMM LSALFGIKPA WFSDPNTARA MVIIVNTWLG YPYMMILCMG LLKAIPDDLY EASAMDGAGP FQNFFKITLP LLIKPLTPLM IASFAFNFNN FVLIQLLTNG GPDRLGTTTP AGYTDLLVSY TYRIAFEGGG GQDFGLAAAI ATLIFLLVGA LAIVNLKATR MKFD
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