Gene SNSL254_A4567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4567 
Symbol 
ID6483281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4435100 
End bp4437196 
Gene Length2097 bp 
Protein Length698 aa 
Translation table11 
GC content54% 
IMG OID642739793 
Productputative lipoprotein 
Protein accessionYP_002043475 
Protein GI194445822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.0407808 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CACATCTGCT CAGCGTGCTG GCGCTGGGTA TTAGCGCGGC CTGCCATGCC 
GAAACATATC CAGCCCCTGT TGGGCCTTCA CAATCTGACT TTGGCGGCGT GGGCCTGCTG
CAAACGCCGA CAGCGCGTAT GGCGCGTGAA GGGGAGATGA GCCTGAACTA TCGCGATAAC
GATCAGTACC GCTACTACTC GGCTTCGGTT CAGCTTTTCC CGTGGCTGGA AACCACGTTG
CGCTATACCG ATGTCCGTAC GAAAAAGTAC AGCAGCGTGG AATCATTCTC CGGCGACCAG
ACTTACAAAG ATAAAGCGTT TGATGTGAAA CTGCGGTTGT GGGAAGAGAG TTACTGGATG
CCGCAGGTGG CGGTTGGCGC GCGCGATATC GGCGGGACGG GGCTGTTTGA TGCGGAATAT
ATTGTAGCGA GTAAGGCCTG GGGGCCGTTT GATTTTTCAT TAGGTCTCGG CTGGGGCTAT
CTTGGCACCA GCGGCAATGT GTCTAATCCT TTCTGTTCGT ATAGTGATAA ATTCTGTTCA
CGTGATAACA GTTATAAAGA GGCAGGTTCC GTCGACGGTA GCGATATGTT TCACGGCCCG
GCCTCGCTGT TTGGCGGCGT GGAATACCAG ACCCCGTGGC AACCGCTACG CCTGAAGCTG
GAGTATGAAG GCAATAACTA TCAGCAGGAT TTTGCGGGTA AACTGGAACA GAAGAGCAAG
TTTAACGTCG GCGCCATTTA CCGCGTCACC GATTGGGCCG ACGTTAACCT CAGCTACGAG
CGCGGCAACA CCTTTATGTT TGGCGTCACG CTGCGCACCA ATTTCAACGA TTTACGTCCC
GCGTATCATG ACAATTCACG CCCGCAATAC CGACCACAGC CGCAGGATGC CATCCTGCAA
CATTCGGTAG TGGCTAATCA ATTAACGTTA TTGAAATATA ATGCCGGTCT GGCGGACCCG
AAAATCCAGG TCAAAGGCGA TACGCTGTAC GTTACCGGTG AACAGGTGAA GTACCGCGAC
TCCCGTGAAG GGATCGTGCG CGCTAACCGG ATCGTCATGA ACGATCTGCC GGAGGGGATC
CGCACGATCC GCGTGACGGA AAACCGCCTT AATCTGCCGC AGGTCACCAC TGAAACCGAT
GTCGCCAGCC TGAAACGCCA TCTGGAAGGC GAACCGCTGG GACATGAAAC TCCGCTGGCG
CAAAAACGTG TGGAGCCGAT CGTGCCAGAG AGTACTGAAC AGGGTTGGTA TATCGACAAG
TCGCGCGTTG ATTTTCATCT TGATCCCGTG CTGAATCAGT CGGTAGGCGG CCCGGAAAAC
TTCTATATGT ATCAGCTGGG CGTAATGGGA ACTGCGGATC TGTGGGTCAC GGATCATCTG
CTCACCACGG GCAGCGTGTT TGCCAATATC GCCAACAACT ACGACAAATT TAACTACACC
AATCCGCCGA AGGACTCGCA TCTGCCGCGG GTGCGTACGC ATGTCCGTGA GTATGTGCAG
AACGATGTTT ATGTGAATAA CCTACAGGCC AACTACTTCC AGTATTTTGG CAATGGTTTC
TATGGGCAGG TCTATGGCGG TTATCTGGAG ACCATGTTTA GCGGTGCCGG GGCGGAAGTC
CTGTATCGCC CGGTAGACAG CAATTGGGCG TTTGGCCTGG ATGCCAACTA CGTGAAACAG
CGTGACTGGC GTAGCGCGCA GGATATGATG AAGTTTACCG ATTACAGCGT GAAGACCGGA
CATTTGACCG CATACTGGAC GCCGTCGTTC GCCCAGGATG TGCTGGTGAA AGCCAGCGTT
GGTCAGTATC TGGCGGGCGA TAAAGGCGGT ACGCTGGAGA TCGCCAAACG CTTCGATAGC
GGCGTCGTTG TCGGCGGTTA CGCGACGATT ACCGATGCGT CGCCGGATGA ATATGGGGAA
GGGGATTTTA CCAAAGGCGT ATATGTTTCC GTGCCGCTGG ATATCTTCTC GTCCGGCCCA
ACCCGAAGTC GTGCGGCAAT TGGCTGGACG CCGCTGACGC GTGACGGTGG TCAACAGCTT
GGCCGTAAGT TTGGCCTGTA TGATATGACC AGTGACAGGA GCGTAAATTT CCGTTAA
 
Protein sequence
MKKTHLLSVL ALGISAACHA ETYPAPVGPS QSDFGGVGLL QTPTARMARE GEMSLNYRDN 
DQYRYYSASV QLFPWLETTL RYTDVRTKKY SSVESFSGDQ TYKDKAFDVK LRLWEESYWM
PQVAVGARDI GGTGLFDAEY IVASKAWGPF DFSLGLGWGY LGTSGNVSNP FCSYSDKFCS
RDNSYKEAGS VDGSDMFHGP ASLFGGVEYQ TPWQPLRLKL EYEGNNYQQD FAGKLEQKSK
FNVGAIYRVT DWADVNLSYE RGNTFMFGVT LRTNFNDLRP AYHDNSRPQY RPQPQDAILQ
HSVVANQLTL LKYNAGLADP KIQVKGDTLY VTGEQVKYRD SREGIVRANR IVMNDLPEGI
RTIRVTENRL NLPQVTTETD VASLKRHLEG EPLGHETPLA QKRVEPIVPE STEQGWYIDK
SRVDFHLDPV LNQSVGGPEN FYMYQLGVMG TADLWVTDHL LTTGSVFANI ANNYDKFNYT
NPPKDSHLPR VRTHVREYVQ NDVYVNNLQA NYFQYFGNGF YGQVYGGYLE TMFSGAGAEV
LYRPVDSNWA FGLDANYVKQ RDWRSAQDMM KFTDYSVKTG HLTAYWTPSF AQDVLVKASV
GQYLAGDKGG TLEIAKRFDS GVVVGGYATI TDASPDEYGE GDFTKGVYVS VPLDIFSSGP
TRSRAAIGWT PLTRDGGQQL GRKFGLYDMT SDRSVNFR