Gene SNSL254_A4538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4538 
Symbol 
ID6485024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4413361 
End bp4413993 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content47% 
IMG OID642739764 
Productputative phage tail protein 
Protein accessionYP_002043446 
Protein GI194442273 
COG category[R] General function prediction only 
COG ID[COG4385] Bacteriophage P2-related tail formation protein 
TIGRFAM ID[TIGR01634] phage tail protein, P2 protein I family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAC TGCTTCTGCC GCCGCCGCTG GCCAGCGACG AACGTTTCTC AATTCTGGCA 
AATATCGCCG CCGAACGCTT TGCGCAAATC GACCTGACGG CGTTGCTGGT CTATCTGGTG
GATATCGTTG ATGCCTCGGC ATTGCCCTCG TTGGCCGGGC AGTTTCATGT TCAGGGGCTT
GAAGGCTGGC TATTTGCCGC CAATGAACAG GAGAAACGAG AGTTAATTAA ACAGGCGATT
GAACTGCATA AATATAAAGG AACTCCCTGG GCCGTTCGCC GCGTTCTGGA AATATTATCC
TTACCCGGCA CGATTTCCGA ATGGTTTGAG TATGGCGGTA AGGCTTATTT TTTTAAGGTT
GAAATTGAGC TAATTAACCA GGGCATGGAT GAAAATCTGT TTAATAACCT GGTCGATCTT
ATTCATGAGT ATAAGAACGT GCGCTCAAAA CTGGAAGCGT TAATTGTCTG GATAATTAAC
CAAAGCGCTA TTCCTGTTAT TGGCAGCGCG CTTTACGGTG GAGAAATAAC GACCGTCTTA
CCCTTCCAGG TTCTGGAAGT TCAACAAACT AAACCGATCT ATTTCGGTAC AGGGCAATGG
AGCCTTGAAA TTACATCTAT TTACCCGGAG TAA
 
Protein sequence
MDKLLLPPPL ASDERFSILA NIAAERFAQI DLTALLVYLV DIVDASALPS LAGQFHVQGL 
EGWLFAANEQ EKRELIKQAI ELHKYKGTPW AVRRVLEILS LPGTISEWFE YGGKAYFFKV
EIELINQGMD ENLFNNLVDL IHEYKNVRSK LEALIVWIIN QSAIPVIGSA LYGGEITTVL
PFQVLEVQQT KPIYFGTGQW SLEITSIYPE