Gene SNSL254_A4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4533 
Symbol 
ID6484246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4407597 
End bp4408460 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content48% 
IMG OID642739759 
Producthypothetical protein 
Protein accessionYP_002043441 
Protein GI194443709 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTAA TCACCGATCT GGATGGAACA TTACTCACCT CGCAGAAAAC AATCAGCCCG 
CGCACGCGCC AGGCGCTGAT TGCGTTCCGC CAGAACGGTG GTCTACTGGC GGCATGTTCC
GCCAGACCGG TCTCCTCAAT GGTACGCCTG CTACGCCAAC AACAGGTTGA TAGGTTGTTT
AGCTGGTGCG CCGGTTTTAA CTGCGGACAC CTTCTGGAGA TGGCGGAGCA GCGCATTATT
CATGCTGCCC CGCTGACCGC CACAGACCTG TGGAATATTG ACCAGCATAT TTCTCTTTCC
CGCTATCACC ACCATTTTTT TAGTGCCGAA GCAATTCACC ATCGTGACGA TAGGCTGATT
GCGCACTGGA CAACATATGA GGCTCGCTTA TTTGGGTTAC CGCTTATAAC TGAAACTGCA
GAAAATATCT TTAATCGTCG CAACATATAT AAAATTACAC TTGTTGCCGC ATCTCCGGAG
ATAGATAATC TGTGTACAGA AGTGAATAAT CACCTGCCTT GTGGATATTA TGCGGTTGTC
ACGGGAGAAA ATTATATTGA TATTCAAAGA TCCGATGTAA ATAAAGGGTG CATAATAGAA
CAATTAATTC ATCATTTAAA TATATCTTCT GACAAGGTGG TCGCGATTGG CGACCAGCAG
AATGATGTCA GCATGTTTGC CGCCGCCGGA ATCAGCATCG CAATGGGCAA CGCGCCGGAT
GCAGTAAAGC GGCAGGCCGG CTATGTGACT GCCACGAATG ATGAGGAGGG TATCGTCCGT
GCGTTGGAGT GGTTGCGTTG CCTTACGCAT CCAGTTACCA TGCGCCAAAG GTTGACGGCG
GCGAAAGATA ATGAATCCAA TTAA
 
Protein sequence
MLLITDLDGT LLTSQKTISP RTRQALIAFR QNGGLLAACS ARPVSSMVRL LRQQQVDRLF 
SWCAGFNCGH LLEMAEQRII HAAPLTATDL WNIDQHISLS RYHHHFFSAE AIHHRDDRLI
AHWTTYEARL FGLPLITETA ENIFNRRNIY KITLVAASPE IDNLCTEVNN HLPCGYYAVV
TGENYIDIQR SDVNKGCIIE QLIHHLNISS DKVVAIGDQQ NDVSMFAAAG ISIAMGNAPD
AVKRQAGYVT ATNDEEGIVR ALEWLRCLTH PVTMRQRLTA AKDNESN